YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: meu6
Organism: Schizosaccharomyces pombe
Length: 651 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for meu6.

Description E-value Query
Range
Subject
Range
SLAP1_CLOTH - Cell surface glycoprotein 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 ...
251.0 [0..1] [643..1379]
SLP1_CLOTM, SLAP... - (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein B) (S-layer protein 1), Cell sur...
237.0 [0..1] [601..773]
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
233.0 [0..8] [648..960]
gi|37930527, gi|... - gi|37930527|gb|AAP74661.1| elicitor-like transglutaminase M81 [Phytophthora infestans], gi|23505399|...
232.0 [0..6] [651..607]
gi|33310026 - gi|33310026|gb|AAQ03243.1|AF414112_1 putative cell wall protein FLO11p [Candida albicans]
gi|68482880, gi|... - gi|68482880|ref|XP_714666.1| putative cell wall adhesin [Candida albicans SC5314], gi|46436253|gb|EA...
221.0 [0..2] [649..198]
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
218.0 [0..4] [651..714]
gi|88188037, gi|... - gi|88602575|ref|YP_502753.1| mucin 2, intestinal/tracheal [Methanospirillum hungatei JF-1], gi|88188...
207.0 [0..8] [650..1484]

Back

Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYEGREERP EQIAEPTFEN VSEHNEHDSG SAEAQVETLE VPLSNETDND DATENAVPAE  60
   61 VQAPEEPKEP ETVDNIDPAD DDPNSVAAPK VEEKKSKKKA KDEKPLTYTT GGYLYCRSNG 120
  121 LIPHVMKRYF YMLEGPMSMD LLDHYYKKHF HGTLQGNPTE P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLASEQMHDS DADSLFQSAN DHLNRIAKAT QDCRGLLFYS KSQSTSVPSG IINLTDAVSI  60
   61 EPGTGNKFTI NFNNGKSETL EALDPESKNT WITDLKNAIA KKKE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.959
Match: 2dhkA
Description: No description for 2dhkA was found.

Predicted Domain #3
Region A:
Residues: [266-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKDKIKELRA YNDTLKRLGK LAARSGPSAS ETFRYFLPML SNGRDAKKSS SKSHGGKQNN  60
   61 SVAKDGLFDF FQNMIKGKTP QNDTASPIDN ET

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [358-539]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SADPVDTTVE AQSVEVPENE TNQIPTTEEH FPATTEEVAP ASEEKPATGP AEESTSTQNV  60
   61 EQASTQNDNG TPIGQIADAI EEDVKGTAQS VEQAFIEETD IALPDIALPD VATPTADDQD 120
  121 PSTAATNEES VVSNEDRTSK KAGKKHHRHH KKKKGGNKRV FGFKLHKYAK PTKSVKTLQA 180
  181 DP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [540-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLEFAKAGFE IFPSNLSKKL SGLVQKKVHK KFDKDGRLKE ISQFSKTTIK PETPLTPTTT  60
   61 PTPRTAAQED PAEETTDALA SAEGENNQMP QVLETEAAPS IASEGRSITV NA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle