| Protein: | mei4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 517 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mei4.
| Description | E-value | Query Range |
Subject Range |
|
|
166.0 | [0..207] | [508..1539] |
|
|
153.0 | [0..148] | [505..1334] |
|
|
148.0 | [0..13] | [515..599] |
|
|
144.0 | [0..131] | [511..1407] |
|
|
142.0 | [0..156] | [495..1385] |
|
|
139.0 | [0..146] | [511..1496] |
|
|
138.0 | [0..180] | [505..1501] |
|
|
130.0 | [0..140] | [511..1476] |
|
|
128.0 | [0..182] | [514..1497] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MVENQGNVEA HGKPKKVILS LSLKESSKIN DSQNVSNVSS KEKCETEALL REENKENLSS 60
61 DSIRQMIFGD EMAGFVDTGE KPPCSYATLI GLAILQSHNK QLTLSGIYTW IRNTFRYYLN 120
121 HDGGWQNSIR HNLSLNKAFI KVEKPKGKTL KGHYWTIDPD HMQNFVSVRL
|
| Detection Method: |  |
| Confidence: | 26.0 |
| Match: | 1d5vA |
| Description: | Adipocyte-transcription factor FREAC-11 (s12, fkh-14) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.99681957904233 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| transcription repressor activity | 3.85678231380989 | bayes_pls_golite062009 |
| transcription activator activity | 3.70589483230587 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.58179858678904 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.60738445921725 | bayes_pls_golite062009 |
| protein binding | 1.80415286835431 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.96257232341735 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.66743181561551 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.322180400748724 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 0.23177057841536 | bayes_pls_golite062009 |
|
Region A: Residues: [171-284] |
1 11 21 31 41 51
| | | | | |
1 HRSHSTDSNS KKRPSSKCHE IKPLTTREIP LARKRSRLNS FNSSTSTSGS SSNVAAEVSN 60
61 DASQPSNQDS SLNSNIVKPP LPPSNVQSNS SSSENVPKPN AETQEDLPTI DAHE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [285-517] |
1 11 21 31 41 51
| | | | | |
1 SSLYENVNDS RLYEVPACRN MALNTGYSDA DPGYLRTSFR SNSHNSLPYS ANEEEDVLQA 60
61 DFLVSQQSSM VSSYVSSRDP HSMPYYRREP IPLRPSSRFY EYTRPTYGRT DTSCSAPGAF 120
121 CSTQINSPSS YINYSKCAPS SPTLSLQKHR EHVKSLLYVP DLTPSFDGSD PWNPSSQLLS 180
181 EPLFDQHSFQ SSLDDLMSVT CFRDSPELNH ESSGYSSAPL MPSNRAFIND FSL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
