| Protein: | mac1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 756 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mac1.
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..173] | [756..251] |
|
|
266.0 | [0..173] | [756..251] |
|
|
259.0 | [0..173] | [756..140] |
|
|
256.0 | [0..3] | [647..4] |
|
|
253.0 | [0..154] | [751..201] |
|
Region A: Residues: [1-283] |
1 11 21 31 41 51
| | | | | |
1 MIRNTLAFLA ILFLLIPTAL LIIGSVSVPS TRMTLAKVEG TEFGIFGTCT GNGTDCTETS 60
61 FGYNASSSLI DDFYYKGDKR LVLSKVLITH IISAFLSFLS AIFVFFSIFL VNQAVNIINI 120
121 IVVFITTLLT CLAFAIELVL FLPHNTWQSY VTAGAIGSDL IAILALCLRS VSISRIGQKS 180
181 ARLEHVDTMN SSYSSYKTDV KYPLALDDKL SSVPTLPKFH DALTSTSEFG PPSDSGDTVG 240
241 TTQYPGDIKY ATGYESTVAS PVPSRVAKLS SRDTPSIIAD YDE
|
| Detection Method: |  |
| Confidence: | 1.06 |
| Match: | 1xioA |
| Description: | Anabaena sensory rhodopsin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 3.58361836489063 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.33630997080952 | bayes_pls_golite062009 |
| signal transducer activity | 3.11942296016938 | bayes_pls_golite062009 |
| molecular transducer activity | 3.11942296016938 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.95733170421117 | bayes_pls_golite062009 |
| peptide receptor activity | 1.1212930259621 | bayes_pls_golite062009 |
| peptide receptor activity, G-protein coupled | 1.10830486743897 | bayes_pls_golite062009 |
| binding | 0.926116249600475 | bayes_pls_golite062009 |
| peptide binding | 0.889667813639602 | bayes_pls_golite062009 |
| neurotransmitter binding | 0.757435102903059 | bayes_pls_golite062009 |
| neurotransmitter receptor activity | 0.720585549720668 | bayes_pls_golite062009 |
| neuropeptide receptor activity | 0.069783659085636 | bayes_pls_golite062009 |
| neuropeptide binding | 0.069783659085636 | bayes_pls_golite062009 |
|
Region A: Residues: [284-346] |
1 11 21 31 41 51
| | | | | |
1 FRKSESSPSR SSVLSTSKPE VHETEGYCPH KTGNRPGFPS LNIPRTRPTT AGIANTQFDL 60
61 EPY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [347-511] |
1 11 21 31 41 51
| | | | | |
1 RNRQAGSISS EGTDSRFFDV ENQVSVAQTP SVKPEMFPKT ARPFAAIHAN ASSTQLRNTE 60
61 NITHPGIPNH FAKTTSSVFD EPPATRMPQT RSPVNDHSSF PSDLPIKGEM STNMTGAPRV 120
121 GSRNNSSNDL HAQAGMLKNV GNGPRNAPRN NSSNNLHAQG GMPMN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [512-756] |
1 11 21 31 41 51
| | | | | |
1 MRGPRGAPRN NSSGDLHIQS GMPMNGRNGP RDTSRNNSSS DLYAQSGMHP NMNNGHRGAP 60
61 RNNSSNDLHA HGGMPVNMRG PRNTSRNNSS SEFNAQIPMN LRNGPRNASR SNSSTDLFGQ 120
121 SGIPGNSRGM PTSPNSRNNS ALDLSMHGIP LANNSRQFKR PSYGNMSRPS FELNGSRNPS 180
181 HGSLNTAHAG MGYGPRSMMR DPQNLSNVPP VSNTLDQLSG NADFELPVRG NRNNRRGPGG 240
241 NRMIR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
