| Protein: | tif32 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 932 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tif32.
| Description | E-value | Query Range |
Subject Range |
|
|
364.0 | [0..7] | [932..996] |
|
|
363.0 | [0..7] | [932..998] |
|
|
363.0 | [0..7] | [932..998] |
|
|
363.0 | [0..7] | [932..997] |
|
|
363.0 | [0..7] | [932..998] |
|
|
362.0 | [0..7] | [932..997] |
|
|
362.0 | [0..7] | [932..998] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MAPPQGKPEN VLRLADELIA LDQHSSALQS LHETIVLKRS RNAQGFSLEP IMMRFIELCV 60
61 HLRKGKIAKE GLYTYKNAVQ NTSVTAIENV VKHFIELANK RVQEAQEKAD KISVEYVDDL 120
121 EATETPESIM MSLVSGDLSK SRTDRALVTP WLKFLWDAYR TVLDILRNNA RLEVMYQLIA 180
181 NSAFQFCLKY QRKTEFRRLC E
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [202-324] |
1 11 21 31 41 51
| | | | | |
1 LLRSHLGNAS KFSNAPHSIN LNDAETMQRH LDMRFSQLNV AVELELWQEA FRSIEDIHSL 60
61 LTFSKRAPAA VMLGNYYRKL IKIFLVCDNY LLHAAAWNRY FTFTNVQKPA TANFVILSAL 120
121 SIP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.750 | 0.823 | translation initiation factor activity | a.118.1 | ARM repeat |
|
Region A: Residues: [325-413] |
1 11 21 31 41 51
| | | | | |
1 IIDANKLSGP SIEAEDAKSK NARLALLLNL SKTPTRETLI KDAISRGVLS FCDQAIRDLY 60
61 QILEVEFHPL SICKKLQPII KRLAESNDT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [414-538] |
1 11 21 31 41 51
| | | | | |
1 AQYIRPLQQV ILTRLFQQLS QVYDSISLKY VMDLATFEEP YDFNPGQIEK FIMNGNKKGA 60
61 FSIRLNHIEN SISFSSDLFS NPIKSSDSVS LQSTPSELIT SQLTRIAKSL SSVLMRFDTD 120
121 FCLLR
|
| Detection Method: | |
| Confidence: | 2.1 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.79393646713264 | bayes_pls_golite062009 |
| DNA binding | 3.49224482622525 | bayes_pls_golite062009 |
| nucleic acid binding | 3.44526829828119 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.974370828939 | bayes_pls_golite062009 |
| transcription factor activity | 2.7749459098618 | bayes_pls_golite062009 |
| binding | 2.73671056234733 | bayes_pls_golite062009 |
| structural molecule activity | 2.72616711594099 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.22614366856306 | bayes_pls_golite062009 |
| transcription activator activity | 1.09150217878747 | bayes_pls_golite062009 |
| transcription repressor activity | 1.00086155936348 | bayes_pls_golite062009 |
| protein binding | 0.726445167461826 | bayes_pls_golite062009 |
| RNA binding | 0.352569950847387 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.294869091673654 | bayes_pls_golite062009 |
| mRNA binding | 0.262190946714123 | bayes_pls_golite062009 |
|
Region A: Residues: [539-932] |
1 11 21 31 41 51
| | | | | |
1 KQQAEAAYER AQAGVEQERK AVIAQRSLLE LRRGQADTLA TQREAELAAQ RALKQKQESE 60
61 AESLRVQEEI NKRNAERIRR EKEAIRINEA KKLAEELKAK GGLEVNAEDL EHLDADKLRA 120
121 MQIEQVEKQN KSMNERLRVI GKRIDHLERA YRREAIPLWE EDAKQQAEHD REIFYEREKQ 180
181 RKEVQERKHE QAIKDKKAFA QFASYIHAYK QNIDDERDKA YQEAYAKAKN VIDAERERQR 240
241 KEIFEQKLAE AIREAEEEAA RAAEEEANRE LHEQEEAQKR AIEERTRAAR EAKEREQREM 300
301 AEKLERQRRI QQERDEEISR KLAEKAAARR ANIGASSPSP GAWRRGGASA GGVSRDSPRY 360
361 SRGGYSRGSV PPRETLAPSK GAYVPPSRRN QQQQ
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
