YRC Public Data Repository - Protein Structure Prediction

Protein:	gst1
Organism:	Schizosaccharomyces pombe
Length:	229 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gst1.

Description	E-value	Query Range	Subject Range
GST2_SCHPO - Glutathione S-transferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gst2 PE=2 SV=1 gst2 - glutathione S-transferase Gst2	180.0	[0..1]	[228..1]
gi\|4468794, gi\|1... - gi\|4468794\|emb\|CAB38119.1\| Glutathione transferase III(b) [Zea mays], pir\|\|T52083 glutathione transf...	180.0	[0..1]	[221..1]
gi\|17385642 - gi\|17385642\|dbj\|BAB32446.2\| glutathione S-transferase [Matricaria chamomilla]	177.0	[0..3]	[228..5]
gi\|116327436, gi... - gi\|116327436\|ref\|YP_797156.1\| glutathione transferase [Leptospira borgpetersenii serovar Hardjo-bovi...	175.0	[0..4]	[218..1]
gi\|116331951, gi... - gi\|116331951\|ref\|YP_801669.1\| glutathione transferase [Leptospira borgpetersenii serovar Hardjo-bovi...	175.0	[0..4]	[218..1]
gi\|67548282, gi\|... - gi\|67548282\|ref\|ZP_00426173.1\| Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-te...	175.0	[0..8]	[229..326]
gi\|24216055, gi\|... - gi\|24216055\|ref\|NP_713536.1\| glutathione S-transferase [Leptospira interrogans serovar Lai str. 5660...	174.0	[0..4]	[218..1]

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Predicted Domain #1

Region A:
Residues: [1-229]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQFTLWSHA HGPNPWKVVQ ALKELDLTYE TRYVNFSKNE QKSPEHLALN PNGRVPTLID  60
   61 HHNNDYTIWE SDAILIYLAD KYDTERKISL PRDHPEYYKV IQYLFFQASG QGIIWGQAGW 120
  121 FSVYHQELVI SAITRYRNEI KRVLGVLEDI LKDRDYLVAN RFTIADLSFI SWNNFLEIIF 180
  181 AEGKFSIEEE VPQLDFEKEF PRTYSWHQRL LARPASKATF EERSKALDN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.522879
Match:	1jzrA
Description:	Yeast prion protein ure2p, nitrogen regulation fragment
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
antioxidant activity	3.66884588063322	bayes_pls_golite062009
peroxidase activity	3.43831566988273	bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor	3.43831566988273	bayes_pls_golite062009
glutathione peroxidase activity	2.56524997297011	bayes_pls_golite062009
peroxiredoxin activity	2.12777217096121	bayes_pls_golite062009
thioredoxin peroxidase activity	1.96134566495756	bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors	1.8187537496904	bayes_pls_golite062009
protein disulfide oxidoreductase activity	1.47769936616412	bayes_pls_golite062009
disulfide oxidoreductase activity	1.32811008894503	bayes_pls_golite062009
selenium binding	1.1082524159827	bayes_pls_golite062009
binding	0.704132579378598	bayes_pls_golite062009
catalytic activity	0.672192331361968	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: