| Protein: | RhoGAPp190-PA, R... |
| Organism: | Drosophila melanogaster |
| Length: | 1561 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RhoGAPp190-PA, R....
| Description | E-value | Query Range |
Subject Range |
|
|
1261.0 | [0..2] | [1557..11] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MRQFNISVIG LSGTEKDRGQ VGVGKSCLCN RFMRPMADDY FIDHISVLSQ SDFSGRIVNN 60
61 DHFLYWGDVR KTTEEGVEYQ FNIIEQTEFM DDSTFQAFKV GKMDPYSKRC TATKVFSAEK 120
121 LMYICKNQLG IEKEYEQKVM PDGRLSIDGF VVVFDVSPVP NRSVEKQVEF VQNVIATILK 180
181 NKKPLVLVTT KNDDAYELYV REAEKISQRK DYKSTVQLIE TSAHES
|
| Detection Method: |  |
| Confidence: | 43.39794 |
| Match: | 2bcgY |
| Description: | Structure of doubly prenylated Ypt1:GDI complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.30574971150356 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.562985888331998 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.529737976676427 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.519184152871305 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.518588340023146 | bayes_pls_golite062009 |
|
Region A: Residues: [227-560] |
1 11 21 31 41 51
| | | | | |
1 INIDLAFLLL AQMIDKVKNR VKIISYQESA KSRKELLDTR SEAVTRLIRN QITDYHVLWS 60
61 QGSKMLSQYR EWNEFLNIFG HEAGQKLFRR HMKKLRDDHL NKKLHQYLDK FALALEYLLP 120
121 DIGALNISDD DAWECARNYL QNHIEFEQYF FECPQASWTE LVDMDEAEDE ARIPFDVLET 180
181 SEAETVFRNY LNSVQQDKKK IGWKQQFKML LEESGFVTPG KQLSEVRVLF MGRECFEALS 240
241 EHDCQQIYDI HQDDIIEKSK QNFVELLLEH AQYFLQFKNV DNITQEDVRQ ITDVIQEDSR 300
301 YKMLDRLDQE RRLMLVQHLR FIHCPIRDHC PFFY
|
| Detection Method: | |
| Confidence: | 11.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [561-796] |
1 11 21 31 41 51
| | | | | |
1 NCVDSLIEEV LSDKSASNHK TPSGGGWKSS GSGSDRTLNL LIVGSEHLAS DLLNDIRICT 60
61 GSKGEYIYEN QTYYLNYRIA NGDMEAFKAI DVYSSGLICV YSNQQSFETL KDNLERTLLC 120
121 NLELEDKFEN LPIVLVYQPQ DLKENEVEYL RNEGMRLSEM LHCDFIDHTQ NHQKYVYDIL 180
181 NIVILSLKLT EMKSYEPYPS NHTDLRILCC IFCGDQYDIE NIVQPLVEES TLVKAN
|
| Detection Method: | |
| Confidence: | 3.4 |
| Match: | 1ukvY |
| Description: | Structure of RabGDP-dissociation inhibitor in complex with prenylated YPT1 GTPase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.24194351030563 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.287179026036565 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.257973454506492 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.248489674630823 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.247952984919472 | bayes_pls_golite062009 |
|
Region A: Residues: [797-923] |
1 11 21 31 41 51
| | | | | |
1 EHSIIVDVFI GDAKRRVEFI LSSYHGTSQY RDELIHGYIY FYSTKRRSSL ANLSILAAQN 60
61 ANIPLQIIAV TESGGVNAFF NSDICQFLIT EGNAVADRFK GSFMTFSADQ YVKFAFYNPF 120
121 LKTAWDN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [924-1112] |
1 11 21 31 41 51
| | | | | |
1 KYEVENLHVE ESITLDSGEG TLENSVNQMP RPPPRHESYM LSNTLGTDGS GSENYEMAPT 60
61 RSLNSLNEER DISLDEIYDD NEKPKHLHQK WLEDKSDGRR NMNKNLIWNN FSGSTHAYTT 120
121 GRRHIDSNLN KIRPKGPSQT LKVGEAPSRN CPAMSSSTFT LPTQQPGKLN MKNFQLVSDA 180
181 VAKMNFTGS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1113-1311] |
1 11 21 31 41 51
| | | | | |
1 GSGSGSGSGS GSTGLGLGLG SGSGCMGDSF LEPVDKDGKR YDHAQLDGED EDSEELAEYE 60
61 QIYENEDCTE SDSCASSTER RVRQQNAYYK ASKKPVAAKK QKKKKVAIPV QTPRVPPFGS 120
121 YVSPPEIPLH YQRMAVGGSG PEKPEPCVPE FMKSDKSPEY SMVPELAGAG IFGAENLPEY 180
181 NMNQAKCLKD FEKLEKRRI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1312-1561] |
1 11 21 31 41 51
| | | | | |
1 KEETARQRKL QEKEKEQEKK LKRKLKQNAK GLVESAEAQF GKLMITSEQG EIPIFLNKCV 60
61 EFIEKEGLDS EGIYRVPGSR AHVDMLFQRF EEDTNTEIDA LDIPVNAVAT ALKDFFSKRL 120
121 PPLFSKDIIK ELEEIAGSRG VGNSKLNVEV KTDRSCRLIA LKSLLQKLPP INFAILKYIF 180
181 QHFVHVSDNS KLNSMDSKNL AICWWPTLIP IDFTDMGHFE QLRPYLEDIV QTMIDQFPYL 240
241 FCGKDAFVMV
|
| Detection Method: | |
| Confidence: | 48.39794 |
| Match: | 2ee5A |
| Description: | No description for 2ee5A was found. |
