YRC Public Data Repository - Protein Structure Prediction

Protein:	CG11151-PA, FBpp...
Organism:	Drosophila melanogaster
Length:	115 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11151-PA, FBpp....

Description	E-value	Query Range	Subject Range
gi\|45384406, gi\|... - gi\|45384406\|ref\|NP_990274.1\| hydroxysteroid (17-beta) dehydrogenase 4 [Gallus gallus], gi\|2315981\|gb...	144.0	[0..3]	[115..621]
gi\|1620451 - gi\|1620451\|emb\|CAA64427.1\| multifunctional protein 2 [Rattus norvegicus]	141.0	[0..2]	[115..619]
NLTP_BOVIN - Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2	140.0	[0..3]	[114..427]
gi\|126352659, gi... - gi\|45775304\|gb\|AAS77255.1\| 17 beta-hydroxysteroid dehydrogenase type 4 [Equus caballus], gi\|12635265...	140.0	[0..3]	[115..621]
gi\|66396563, gi\|... - gi\|73853814\|ref\|NP_001027490.1\| hypothetical protein LOC613082 [Xenopus (Silurana) tropicalis], gi\|6...	139.0	[0..3]	[115..626]
gi\|27881888, gi\|... - gi\|42409521\|ref\|NP_956430.1\| hydroxysteroid (17-beta) dehydrogenase 4 [Danio rerio], gi\|27881888\|gb\|...	138.0	[0..3]	[115..613]

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Predicted Domain #1

Region A:
Residues: [1-115]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQSDAVFQ KIIDGLKENE AKAKAVNGVF LYKITKDGKV AKEWTLDCKN AKAYEGPAQG  60
   61 IKVDTTLTVA DEDMVDIALG KLNPQAAFMK GKLKIAGNIM LTQKLAPLLK TDAKL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.154902
Match:	1iktA
Description:	SCP2-like domain of MFE-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
sterol carrier protein X-related thiolase activity	0.757548542700829	bayes_pls_golite062009
binding	0.435013873390091	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: