| Protein: | Bap60-PA |
| Organism: | Drosophila melanogaster |
| Length: | 515 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Bap60-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
646.0 | [0..9] | [514..25] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MSQRFAPGQA PVQSRYQPPP PAPGMRPYPP PGASFPPRGF PLHPNTTQPV PGTANVAGVP 60
61 GVPGVPGVPG PSLLQRAAQQ PGFQSSLRGT GAGGGGVGSG GGSKRSNESR SLGGGGSKSD 120
121 FATAKKKKKL AEKILPQKVR DLVP
|
| Detection Method: |  |
| Confidence: | 23.39794 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [145-232] |
1 11 21 31 41 51
| | | | | |
1 ESQAYMDLLT FERKLDATIM RKRLDIQEAL KRPMKQKRKL RIFISNTFYP SKEPTNDGEE 60
61 GAVASWELRV EGRLLEDGKG DPNTKIKR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [233-399] |
1 11 21 31 41 51
| | | | | |
1 KFSSFFKSLV IELDKELYGP DNHLVEWHRT HTTQETDGFQ VKRPGDRNVR CTILLLLDYQ 60
61 PLQFKLDPRL ARLLGVHTQT RPVIISALWQ YIKTHKLQDA HEREYINCDK YLEQIFSCQR 120
121 MKFAEIPQRL NPLLHPPDPI VINHFIESGA ENKQTACYDI DVEVDDT
|
| Detection Method: | |
| Confidence: | 30.69897 |
| Match: | 1uhrA |
| Description: | Solution structure of the SWIB domain of mouse BRG1-associated factor 60a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.01592136607858 | bayes_pls_golite062009 |
| basal transcription repressor activity | 3.31155980072144 | bayes_pls_golite062009 |
| transcription activator activity | 3.16006262739093 | bayes_pls_golite062009 |
| binding | 2.67987108623459 | bayes_pls_golite062009 |
| protein binding | 2.63183933218658 | bayes_pls_golite062009 |
| transcription coactivator activity | 2.58234407051051 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.32480271621458 | bayes_pls_golite062009 |
| transcription repressor activity | 1.98538788872171 | bayes_pls_golite062009 |
| transcription factor binding | 1.73032563380905 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.60414428986898 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.06026105710513 | bayes_pls_golite062009 |
| structural molecule activity | 0.66106995897056 | bayes_pls_golite062009 |
| p53 binding | 0.19984769109713 | bayes_pls_golite062009 |
| catalytic activity | 0.121624777548864 | bayes_pls_golite062009 |
|
Region A: Residues: [400-515] |
1 11 21 31 41 51
| | | | | |
1 LKNQMNSFLM STASQQEIQG LDTKIHETVD TINQMKTNRE FFLSFAKDPQ MFIHRWIISE 60
61 TRDLKLMTDV AGNPEEERRA EFYYQPWTHE AVSRYFFTKV NQKRAELEQA LGIRNG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
