YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PPP4R2r-PB, PPP4...
Organism: Drosophila melanogaster
Length: 609 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPP4R2r-PB, PPP4....

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
251.0 [0..51] [609..693]

Back

Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTMENSDEI MQILERFTDL KQKEIPKELE EYLQYVAKTG DTIFKWSSLK YLFREKLLSV  60
   61 IKHFNEDSPR LEEIPNYPNV DPFNYETMKS SLLERLDLFN AAPFTVQRLC ELLIDPRKQY 120
  121 SRIDKFMRAL EKNILVVSTI DPGRKRTESE NGDSLDSVVN GDLSMEVNID IEMENNNGNA 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEGSSPGAGS AGCAQKASCP RSDDNDQPKA KKAKLEIDGE ERSEASDETD TEVATRVKNE  60
   61 KDEKNDNDET DSPHEAAEIE EPDEEVDEAD QETKTTKQPA YGSQKEGEQE ESFPSSADDE 120
  121 AEDPMVSKSI EAEKELVAQE KKREEDKKVA IEPKEEIVKK EEVVESDKPD GKVAQLGDKA 180
  181 VVKKSTPPAD GENQEPVKVK AENEKEEKKH APIKT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [396-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKQDDIDSTE TDDAPSAEKP AEEKIASSES KPKTKSEDDP EAETKKSQPE KTETEAAEKS  60
   61 VSDEKQAAEP NAESENRNDL TTSKATEAAQ ESVEKSPVED ASSPAVEDLA AATTPQSPLG 120
  121 AADSAAETPP AETGDDSQAS PLVAAVTPPV LALNDQPMED TPAEEEARVS PSATVEEVVM 180
  181 AESANAGAMA TEEAAKDDPA AMEIDDTSQE VMMQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle