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View Structure Prediction Details

Protein: PPP4R2r-PB, PPP4...
Organism: Drosophila melanogaster
Length: 609 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPP4R2r-PB, PPP4....

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
251.0 [0..51] [609..693]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTMENSDEI MQILERFTDL KQKEIPKELE EYLQYVAKTG DTIFKWSSLK YLFREKLLSV  60
   61 IKHFNEDSPR LEEIPNYPNV DPFNYETMKS SLLERLDLFN AAPFTVQRLC ELLIDPRKQY 120
  121 SRIDKFMRAL EKNILVVSTI DPGRKRTESE NGDSLDSVVN GDLSMEVNID IEMENNNGNA 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEGSSPGAGS AGCAQKASCP RSDDNDQPKA KKAKLEIDGE ERSEASDETD TEVATRVKNE  60
   61 KDEKNDNDET DSPHEAAEIE EPDEEVDEAD QETKTTKQPA YGSQKEGEQE ESFPSSADDE 120
  121 AEDPMVSKSI EAEKELVAQE KKREEDKKVA IEPKEEIVKK EEVVESDKPD GKVAQLGDKA 180
  181 VVKKSTPPAD GENQEPVKVK AENEKEEKKH APIKT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [396-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKQDDIDSTE TDDAPSAEKP AEEKIASSES KPKTKSEDDP EAETKKSQPE KTETEAAEKS  60
   61 VSDEKQAAEP NAESENRNDL TTSKATEAAQ ESVEKSPVED ASSPAVEDLA AATTPQSPLG 120
  121 AADSAAETPP AETGDDSQAS PLVAAVTPPV LALNDQPMED TPAEEEARVS PSATVEEVVM 180
  181 AESANAGAMA TEEAAKDDPA AMEIDDTSQE VMMQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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