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View Structure Prediction Details

Protein: wuho-PA
Organism: Drosophila melanogaster
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wuho-PA.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
466.0 [0..2] [424..1175]

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Predicted Domain #1
Region A:
Residues: [1-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTTISFAEP EIVLGHGRRV LFVNPDDLQI FKEIELPPDL GLKGHTSQSQ ESCTAAAAAS  60
   61 TATAASGQAP GGKEQQLANQ PEEGGTSASA SGLGCATSTS VQNVAYSPDG QLLAVTTSGK 120
  121 QKALLLYRSR PENARLLSAR PLARASSALR FCSDSSSILV TDKTGDCYQY DCVEVEAPPR 180
  181 LLLGHLSVVY DILWSEDQQH IITCDRDDKI RVTNYPATFD IHSYCLGHRE FVSGLALLTE 240
  241 QHIASASGDK TLRVWNYIQG KELLQHELPA PAVRLLVRQL EPEKVFQAAV LFYEHVDALG 300
  301 LYRLERSSDD TWSVTATQLV CAEAGSWSIS NFTLTSDRIY ITGAENERLS LRVYDIATGQ 360
  361 PASSGVPEGW LKMVLDGLGA NEEGAPPFIP EDLSVWFKKR FDNVSDYLER KKRRIEEQQQ 420
  421 QKCG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.154902
Match: 1nr0A
Description: Actin interacting protein 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.96223141144161 bayes_pls_golite062009
protein binding 1.23526205548213 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle