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View Structure Prediction Details

Protein: CG3160-PA
Organism: Drosophila melanogaster
Length: 980 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3160-PA.

Description E-value Query
Range
Subject
Range
gi|18447638 - gi|18447638|gb|AAL68379.1| SD04405p [Drosophila melanogaster]
814.0 [0..1] [980..1]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMFRNCAVL LVIGSICCFI YGLFRLHVEV EPNACRMTYM FGEPMFAKVG VRDGDQYPNY  60
   61 ALYYYYEGLR QPLDPLKRRM TGAPVIFVPG NAGSYKQVRS LASVALRKAM SNDAGIHLDY 120
  121 YTIDYDEELS ALYGGYLHRQ QSYLKLCIRT ILSIYEGRTE QPSIVLIGHS MGGKLAQSVL 180
  181 VDPAIGQHIN TIISISTPLD QPVLNLDTQL EEFYDQTDAV LSKLRTATVP TMTTNVCDSL 240
  241 HQRPPSVQRM ASQDSSARLD NVLLISTGGG NRDLLVRPGL TSSRFNDLHA MTSAIPKVSL 300
  301 SCDHLSAVWC LQFMQAINRF LFSVAYVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1a8sA
Description: CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.6772095035181 bayes_pls_golite062009
catalytic activity 0.629869101256762 bayes_pls_golite062009
binding 0.0992974576097421 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [329-519]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDRSSIAFGT NKQRNLQTAL STFVKPRRRQ QNTVRFGAAG NWHEERRLVI NKYFTNGLKG  60
   61 TFFDLIGLQR QERYRKAAIE ALNVDDEDWL FGCSAEDNNK TGQLYCEKAT SLMHLVQWLP 120
  121 NEDREPRSIA LLDLHNLRKT YVHWTHLLVR LPPSAKRIGY NLDIYDPKER VTDIKMPRWY 180
  181 TMAKLPLINE T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [520-594]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQGTLHHRVR ISEMVDPYQS IRVIVEPLQC INPEYRVTAR ICVPWAAGFE RFQTLKSFDQ  60
   61 KPQLYVNVPT LVPRH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [595-826]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YNTTLNPVTL ELYLDPTCRY RISYEYSYSS ALSRLVLEFY GWLPAHLVCV LLIVLRKQVE  60
   61 TFYDVGTFRS LRPYVGYLQY TSLYIVTACR LLKKLIISSR VFPEPEPLDY SINVSIVIHC 120
  121 AAIALSLLAT LGTWLALTLY GNAFYRLALR ITRLSQATSN VMISIMTHLP ITYGILTIAT 180
  181 AMGTCSGVGL LLAFVFYFLM LSNAYKDYLE DFLWQKAANL VRGKPSAVTE QE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [827-900]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DATEEQNEEQ NALKQNDEQK QQQQEEEEPE ACVGLQNFSF HVTLLLMLFV QLLLNAPSSL  60
   61 AWLRSRRHGI NLPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [901-980]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSLYPSIVVL ASLSLLLQLR APQKCQGYWM LSIAFYILAG VVLLYCQAAI YRLTYVIAGA  60
   61 FALLSAHQSL WILWGRVSRV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle