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View Structure Prediction Details

Protein: gi|24639776, gi|...
Organism: Drosophila melanogaster
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24639776, gi|....

Description E-value Query
Range
Subject
Range
gi|54643959, gi|... - gi|54643959|gb|EAL32702.1| GA17124-PA [Drosophila pseudoobscura], gi|125983756|ref|XP_001355643.1| G...
174.0 [0..11] [263..286]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPENSAIQRC SFIFLTIENE DSALLHQQHT LASTKRNLAG LGIGAAGIGS SIYQQQQQQQ  60
   61 QQRTPHQQQQ QHQAVQGRHA DNDTMAAAAA AVAAQGTLAG SASAGGLNPF GQPASSGEFV 120
  121 YGLDGMDATD LEAGGMPQFA LSPDTYDVRQ RTIENIWDIT V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLNILYKENW TKLAALEIAK FQDQLIKRLN EDVMLQLSHD DVANAPSSSS SSSSSSSSSS  60
   61 SSTGASGVPG SNNPATEAVL LHTHYHHHRA GGVGGVAVGG GPPHEWNFAK AFLYSLTVLT 120
  121 TIVPFMAVYK NGKKSWGDGD LWGHGGYGHD PYTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.39794
Match: 1orqC
Description: Potassium channel KVAP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle