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View Structure Prediction Details

Protein: gi|24639776, gi|...
Organism: Drosophila melanogaster
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24639776, gi|....

Description E-value Query
Range
Subject
Range
gi|54643959, gi|... - gi|54643959|gb|EAL32702.1| GA17124-PA [Drosophila pseudoobscura], gi|125983756|ref|XP_001355643.1| G...
174.0 [0..11] [263..286]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPENSAIQRC SFIFLTIENE DSALLHQQHT LASTKRNLAG LGIGAAGIGS SIYQQQQQQQ  60
   61 QQRTPHQQQQ QHQAVQGRHA DNDTMAAAAA AVAAQGTLAG SASAGGLNPF GQPASSGEFV 120
  121 YGLDGMDATD LEAGGMPQFA LSPDTYDVRQ RTIENIWDIT V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLNILYKENW TKLAALEIAK FQDQLIKRLN EDVMLQLSHD DVANAPSSSS SSSSSSSSSS  60
   61 SSTGASGVPG SNNPATEAVL LHTHYHHHRA GGVGGVAVGG GPPHEWNFAK AFLYSLTVLT 120
  121 TIVPFMAVYK NGKKSWGDGD LWGHGGYGHD PYTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.39794
Match: 1orqC
Description: Potassium channel KVAP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle