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View Structure Prediction Details

Protein: CG2875-PA
Organism: Drosophila melanogaster
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2875-PA.

Description E-value Query
Range
Subject
Range
NOC4L - nucleolar complex associated 4 homolog (S. cerevisiae)
gi|123983406, gi... - gi|123998109|gb|ABM86656.1| nucleolar complex associated 4 homolog (S. cerevisiae) [synthetic constr...
444.0 [0..9] [496..2]

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Predicted Domain #1
Region A:
Residues: [1-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLTVKVND DTGKSLAKKK LQSKANSLLN AEQVDIKTLK GFVQLLKNTP DNMPAGEVMN  60
   61 TLEVIFKNLL KRKAIDGTEK QGLKIKKLYE ETWLLLIENL LVDSQCSVAV KVCMQLIKVE 120
  121 AKHPIAPNKG WPTYWIRGML ETLINSDTTP TTALANYGKY CKNLDVLEIT LTQLKSLVPD 180
  181 EDFKDSPIKA MNFLSIVNLL DMGKSVLSTA DYHVESAKKQ TFNYELNRKR LNNLWATIMA 240
  241 KGNEVDEKLH RQILVVLLER VINHLNDPIQ LTDFLMDSLH QFDGPIALLA LQGIFTLMQK 300
  301 QNITYPDVYE KLYNMFYPRM FHNKYKARLF YLADIFLTST HLPENLVAAF VKRLARLALQ 360
  361 SPTEDAVIMI RFVCNLLLRH TGLQKLIRAS HAVDEVSDPY NQTETDPVKS EAINSSLWEI 420
  421 TLLQKHVVPE VANAARFINS SLPVMEFDLA PLLDRKECNI FDDELQSKAK QFALNYERPT 480
  481 NLALPKNQFV TKYWDLI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1q1sC
Description: Mouse Importin alpha- phosphorylated SV40 CN peptide complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.267627928716605 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle