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View Structure Prediction Details

Protein: FBpp0308661, CG1...
Organism: Drosophila melanogaster
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308661, CG1....

Description E-value Query
Range
Subject
Range
gi|125983332, gi... - gi|54643746|gb|EAL32489.1| GA13242 [Drosophila pseudoobscura pseudoobscura], gi|125983332|ref|XP_001...
gi|54643746|gb|E... - GA13242-PA [Drosophila pseudoobscura], GA13242 [Drosophila pseudoobscura pseudoobscura]
186.0 [0..1] [316..1]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDRLVNSEA NTRRIASVEN CFGSSGVPLA MQGRVLVGEG VLTKMCRKRP KSRQFFLFND  60
   61 ILVYGNIVIG KKKYNKQHIM PLEEVSLESI ADNQTYRNGW YIRTTTKSFV VFAATSTEKQ 120
  121 EWMAHINKCV EDLLRKSGKK PVENHAAVWV PDTDASVCMH CKKTQFTFIQ RRHHCRNCGA 180
  181 VVCAGCSAKK FLLPQQSTKA LRVCDACYER LKH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.69897
Match: 1dvpA
Description: Hrs
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.679196907806154 bayes_pls_golite062009
protein binding 0.0558754826633389 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [214-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPSSLGSGED SAAATGAASG NKLNTTAGDS SNDEDSDEET ASPGGESHDE PRFYGDNSVL  60
   61 SAVEDSSTIT SPSSATTGSL EAPQVTPSVQ SSPAAVATTG SHC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle