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View Structure Prediction Details

Protein: FBpp0305832, CG1...
Organism: Drosophila melanogaster
Length: 468 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305832, CG1....

Description E-value Query
Range
Subject
Range
gi|157129189, gi... - gi|157129189|ref|XP_001655316.1| NADH-ubiquinone oxidoreductase fe-s protein 2 (ndufs2) [Aedes aegyp...
526.0 [0..1] [468..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANIMRRTLI PGLSHLRLRP QLVAAGSAAL TSQETRRGAA KWYPDPEFMK QFSGPVMYPD  60
   61 EVTSLWTVPP WNSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.522879
Match: 2fug5
Description: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [75-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTPVEKSVRN LTLNFGPQHP AAHGVLRLVL ELDGETVMRA DPHIGLLHRG TEKLIEYKTY  60
   61 TQALPYFDRL DYVSMMCNEQ CYSLAVEKLL NIDVPLRAKY IRTLFAEITR ILNHIMAVGT 120
  121 HALDVGALTP FFWLFEEREK MMEFYERVSG ARMHAAYIRP GGVSLDMPLG LMDDIYEFAS 180
  181 KFAERLDEVE DVLTTNRIWV QRTEDIGIVT AEEALNYGFS GVMLRGSGIK WDLRKQQPYD 240
  241 AYNLVNFDVP IGTKGDCYDR YLCRVEEMRQ SLRIIDQCLN QMPAGEIKTD DAKVAPPSRS 300
  301 EMKTSMEALI HHFKLFTQGY QVPPGATYTA IEAPKGEFGV YLISDGSSRP YRCKIKAPGF 360
  361 AHLAALEKIG KQHMLADVVA IIGTLDVVFG EIDR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 2fug4
Description: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
NADH dehydrogenase activity 13.5914597754866 bayes_pls_golite062009
NADH dehydrogenase (quinone) activity 12.311192040385 bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity 12.1563727867842 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 11.7527486559512 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 11.1653559876285 bayes_pls_golite062009
oxidoreductase activity 6.49653654839585 bayes_pls_golite062009
ferredoxin hydrogenase activity 3.63852106070173 bayes_pls_golite062009
oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor 3.63852106070173 bayes_pls_golite062009
oxidoreductase activity, acting on hydrogen as donor 3.45611813853803 bayes_pls_golite062009
oxidoreduction-driven active transmembrane transporter activity 2.72460560332491 bayes_pls_golite062009
oxidoreductase activity, acting on iron-sulfur proteins as donors 2.45015987642707 bayes_pls_golite062009
catalytic activity 1.13542026154948 bayes_pls_golite062009
binding 0.855276486319983 bayes_pls_golite062009
electron carrier activity 0.539561648236344 bayes_pls_golite062009
protein binding 0.33547765747527 bayes_pls_golite062009

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