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View Structure Prediction Details

Protein: Sry-alpha-PA
Organism: Drosophila melanogaster
Length: 530 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sry-alpha-PA.

Description E-value Query
Range
Subject
Range
gi|1832271 - gi|1832271|gb|AAB46474.1| Drosophila simulans serendipity
777.0 [0..18] [515..1]

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Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLLAQLHT CSELIAEGYS STGNIGWLNE FCATFLDFAS DLKARLPEVA PSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [54-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANLDVETIFL CLTQVVTCIT HLERTISMEA PHMTRQHFLD RLDWCLRRLL VSLTQLEGNV  60
   61 TPVKNLEDHS FVELMDLALD HLDDYMEKLA QQRNNSLHIL EESF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [158-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEDTYQLASI VNHIVRHALA FANVAIHSDK KALTALCETL LAECATFHEE AGEPNSGHRK  60
   61 LEALSLERAL YALESFLNEA LLHLLFVSLI DLENASVEKL KDALQRDPAG AQELISAFDT 120
  121 NMDRIQQIGV LAIAFSQDIK TKTIVRSCLA SLESLDACIV PALQLPESTS SAHHAEVLQE 180
  181 HFNQELLIFR NVIHEIIDSC S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [359-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LINNYLDMLG ERIHVQDKSH LKLIVQRGGV VVDHFRLPVN YSGLSEDGKR VHKDLILILR  60
   61 ECQAVVNLDV PVDPKRIVKR LKILYSVLAK LRDLICRDNL EPDSSVASEA QVPSSATRTF 120
  121 VRSSRSFGKR HRSFVKQTGN CSVFGPQDSL AESGHSESDL ISFQITEILR LD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle