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View Structure Prediction Details

Protein: Sry-alpha-PA
Organism: Drosophila melanogaster
Length: 530 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sry-alpha-PA.

Description E-value Query
Range
Subject
Range
gi|1832271 - gi|1832271|gb|AAB46474.1| Drosophila simulans serendipity
777.0 [0..18] [515..1]

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Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLLAQLHT CSELIAEGYS STGNIGWLNE FCATFLDFAS DLKARLPEVA PSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [54-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANLDVETIFL CLTQVVTCIT HLERTISMEA PHMTRQHFLD RLDWCLRRLL VSLTQLEGNV  60
   61 TPVKNLEDHS FVELMDLALD HLDDYMEKLA QQRNNSLHIL EESF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [158-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEDTYQLASI VNHIVRHALA FANVAIHSDK KALTALCETL LAECATFHEE AGEPNSGHRK  60
   61 LEALSLERAL YALESFLNEA LLHLLFVSLI DLENASVEKL KDALQRDPAG AQELISAFDT 120
  121 NMDRIQQIGV LAIAFSQDIK TKTIVRSCLA SLESLDACIV PALQLPESTS SAHHAEVLQE 180
  181 HFNQELLIFR NVIHEIIDSC S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [359-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LINNYLDMLG ERIHVQDKSH LKLIVQRGGV VVDHFRLPVN YSGLSEDGKR VHKDLILILR  60
   61 ECQAVVNLDV PVDPKRIVKR LKILYSVLAK LRDLICRDNL EPDSSVASEA QVPSSATRTF 120
  121 VRSSRSFGKR HRSFVKQTGN CSVFGPQDSL AESGHSESDL ISFQITEILR LD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle