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View Structure Prediction Details

Protein: janB-PA
Organism: Drosophila melanogaster
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for janB-PA.

Description E-value Query
Range
Subject
Range
JANB_DROSE - Sex-regulated protein janus-B OS=Drosophila sechellia GN=janB PE=3 SV=1
225.0 [0..1] [140..1]
JANB_DROMA - Sex-regulated protein janus-B OS=Drosophila mauritiana GN=janB PE=3 SV=1
225.0 [0..1] [140..1]
JANB_DROSI - Sex-regulated protein janus-B OS=Drosophila simulans GN=janB PE=3 SV=1
224.0 [0..1] [140..1]
JANB_DROER - Sex-regulated protein janus-B OS=Drosophila erecta GN=janB PE=3 SV=1
219.0 [0..1] [139..1]
JANB_DROOR - Sex-regulated protein janus-B OS=Drosophila orena GN=janB PE=3 SV=1
216.0 [0..1] [139..1]
JANB_DROTE - Sex-regulated protein janus-B OS=Drosophila teissieri GN=janB PE=3 SV=1
216.0 [0..1] [139..1]
JANB_DROYA - Sex-regulated protein janus-B OS=Drosophila yakuba GN=janB PE=3 SV=1
213.0 [0..1] [139..1]
gi|220943724, gi... - gi|220953624|gb|ACL89355.1| ocn-PA [synthetic construct], gi|220943724|gb|ACL84405.1| ocn-PA [synthe...
ocn-PA - The gene ocnus is referred to in FlyBase by the symbol Dmel\ocn (CG7929, FBgn0041102). It is a prote...
201.0 [0..1] [140..1]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMFKSLRLL PHIVSPFQKC YSTDLISLVG VPRVKITKGQ NRYLLVNIHT HGFTKYGRVI  60
   61 VRGADVDNHL AVFDSILEEL EPEGICAKIL GGGRILNEAE NKKIKIYGTS RTFGGADHTR 120
  121 TRNILQAWTT YKDFKITVKQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 2nmmA
Description: No description for 2nmmA was found.

Predicted functions:

Term Confidence Notes
binding 0.575856086979549 bayes_pls_golite062009
protein binding 0.194429269874431 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle