Protein: | FBpp0311419, fkh... |
Organism: | Drosophila melanogaster |
Length: | 510 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311419, fkh....
Description | E-value | Query Range |
Subject Range |
|
179.0 | [0..1] | [510..1] |
Region A: Residues: [1-100] |
1 11 21 31 41 51 | | | | | | 1 MQKLYAEPPP SSAPVSMASS GGGGPPSGGG GGGGGGGGGG PPPPSNNNPN PTSNGGSMSP 60 61 LARSAYTMNS MGLPVGGMSS VSPQAAATFS SSVLDSAAAV |
Detection Method: | |
Confidence: | 0.97 |
Match: | 1pk8A |
Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [101-203] |
1 11 21 31 41 51 | | | | | | 1 ASMSASMSAS MSASMNASMN GSMGAAAMNS MGGNCMTPSS MSYASMGSPL GNMGGCMAMS 60 61 AASMSAAGLS GTYGAMPPGS REMETGSPNS LGRSRVDKPT TYR |
Detection Method: | |
Confidence: | 22.49485 |
Match: | PF08430.3 |
Description: | No description for PF08430.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [204-342] |
1 11 21 31 41 51 | | | | | | 1 RSYTHAKPPY SYISLITMAI QNNPTRMLTL SEIYQFIMDL FPFYRQNQQR WQNSIRHSLS 60 61 FNDCFVKIPR TPDKPGKGSF WTLHPDSGNM FENGCYLRRQ KRFKDEKKEA IRQLHKSPSH 120 121 SSLEATSPGK KDHEDSHHM |
Detection Method: | |
Confidence: | 31.39794 |
Match: | 1d5vA |
Description: | Adipocyte-transcription factor FREAC-11 (s12, fkh-14) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
nucleic acid binding | 4.99681957904233 | bayes_pls_golite062009 |
transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
transcription repressor activity | 3.85678231380989 | bayes_pls_golite062009 |
transcription activator activity | 3.70589483230587 | bayes_pls_golite062009 |
sequence-specific DNA binding | 3.58179858678904 | bayes_pls_golite062009 |
binding | 3.52874320222492 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 2.60738445921725 | bayes_pls_golite062009 |
protein binding | 1.80415286835431 | bayes_pls_golite062009 |
general RNA polymerase II transcription factor activity | 1.2723726467408 | bayes_pls_golite062009 |
specific transcriptional repressor activity | 0.96257232341735 | bayes_pls_golite062009 |
transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
specific RNA polymerase II transcription factor activity | 0.66743181561551 | bayes_pls_golite062009 |
transcription corepressor activity | 0.322180400748724 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity, enhancer binding | 0.23177057841536 | bayes_pls_golite062009 |
Region A: Residues: [343-510] |
1 11 21 31 41 51 | | | | | | 1 HHHHHSRLDH HQHHKEAGGA SIAGVNVLSA AHSKDAEALA MLHANAELCL SQQPQHVPTH 60 61 HHHQHHQLQQ EELSAMMANR CHPSLITDYH SSMHPLKQEP SGYTPSSHPF SINRLLPTES 120 121 KADIKMYDMS QYAGYNALSP LTNSHAALGQ DSYYQSLGYH APAGTTSL |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.