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View Structure Prediction Details

Protein: Cad96Ca-PA
Organism: Drosophila melanogaster
Length: 773 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cad96Ca-PA.

Description E-value Query
Range
Subject
Range
gi|241666404, gi... - gi|62655257|ref|XP_244186.3| PREDICTED: similar to Eph receptor A4 [Rattus norvegicus], gi|241666404...
402.0 [0..90] [772..223]

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Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYHHHNHES RIIHCRKQLT SWRRRSLLLT IIVVTATVVS LISQEAEAHN QNAPPILYVR  60
   61 ERNWRISETE KVGQIIDRVR AEDPDGDDLI FGIEPRFSLP GGENDASPPE KIPFQIDRET 120
  121 GVVTLNESLA GRAGQNFLIY ITVTDGSYTA KNEVFINILG ERENSSGYRP QTSISNVVHN 180
  181 ISQFLPRFDQ LPGVQSIRNG LPNSRPGGWY PPVPQNNIFG PPPFGNNYPP PPPNIPGVRG 240
  241 EQSGEEEQPD EEVTPTTPVR ISSTTPKSRT KLTPITANNS TRVESAIPAE TTTPSGGHHN 300
  301 NSSSPITIFS LKSGTIPIVV TVGGFFVAIA VLLAYLCRRR LCAISRTLKK TKEKEELAKK 360
  361 SNQSQLSSTL TDDSRNSMVM QQWQGPVAFA NRYVPWERDQ QMGIATSQLS TGVTNGGVSS 420
  421 PGVPSPGTGE PGSNLGPGCL TGGAGSSGAP E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 2dtgE
Description: No description for 2dtgE was found.

Predicted functions:

Term Confidence Notes
cytokine receptor activity 6.1064338595335 bayes_pls_golite062009
transmembrane receptor activity 4.81256300373074 bayes_pls_golite062009
receptor activity 4.66147271961356 bayes_pls_golite062009
prolactin receptor activity 4.60875985371574 bayes_pls_golite062009
cytokine binding 4.43581512268554 bayes_pls_golite062009
growth factor binding 4.06808996928726 bayes_pls_golite062009
molecular transducer activity 3.69234048247377 bayes_pls_golite062009
signal transducer activity 3.69234048247377 bayes_pls_golite062009
ciliary neurotrophic factor receptor activity 3.63249501085562 bayes_pls_golite062009
interleukin-6 receptor activity 3.43159399159985 bayes_pls_golite062009
interleukin-6 binding 3.43159399159985 bayes_pls_golite062009
protein binding 3.24522318184038 bayes_pls_golite062009
binding 3.12471204223368 bayes_pls_golite062009
interleukin-11 receptor activity 3.02772247873413 bayes_pls_golite062009
interleukin-11 binding 3.02772247873413 bayes_pls_golite062009
interleukin-2 binding 2.68205932397612 bayes_pls_golite062009
receptor binding 2.38673889309915 bayes_pls_golite062009
cell adhesion molecule binding 2.32179186005318 bayes_pls_golite062009
cytokine receptor binding 2.19283768224031 bayes_pls_golite062009
glycosaminoglycan binding 2.18940962113822 bayes_pls_golite062009
peptide hormone binding 2.12033076929638 bayes_pls_golite062009
axon guidance receptor activity 2.01367445237355 bayes_pls_golite062009
cytokine activity 1.93281236178924 bayes_pls_golite062009
heparin binding 1.8487779308526 bayes_pls_golite062009
transcription activator activity 1.83493202330837 bayes_pls_golite062009
polysaccharide binding 1.81113796966086 bayes_pls_golite062009
transcription regulator activity 1.79072122451057 bayes_pls_golite062009
nucleic acid binding 1.73360590527753 bayes_pls_golite062009
oncostatin-M receptor activity 1.58642069717164 bayes_pls_golite062009
leukemia inhibitory factor receptor activity 1.58642069717164 bayes_pls_golite062009
DNA binding 1.55706800346354 bayes_pls_golite062009
interleukin-2 receptor activity 1.53856904257833 bayes_pls_golite062009
ciliary neurotrophic factor receptor binding 1.49133343034886 bayes_pls_golite062009
protein kinase activity 1.42856560840953 bayes_pls_golite062009
extracellular matrix structural constituent 1.31280235604913 bayes_pls_golite062009
growth factor activity 1.16355032792247 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.15899955607967 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.12142142875217 bayes_pls_golite062009
kinase activity 1.11027658115625 bayes_pls_golite062009
ciliary neurotrophic factor binding 1.02710126648804 bayes_pls_golite062009
peptide binding 0.92031154055894 bayes_pls_golite062009
transcription factor activity 0.890223821682534 bayes_pls_golite062009
protein dimerization activity 0.86564366658585 bayes_pls_golite062009
actin filament binding 0.848221254225135 bayes_pls_golite062009
fibroblast growth factor receptor binding 0.784976995224461 bayes_pls_golite062009
protein serine/threonine kinase activity 0.703490254739121 bayes_pls_golite062009
structural constituent of muscle 0.68515307569834 bayes_pls_golite062009
kinase binding 0.65927255037265 bayes_pls_golite062009
cytoskeletal protein binding 0.657804692814791 bayes_pls_golite062009
enzyme binding 0.60195860585095 bayes_pls_golite062009
identical protein binding 0.564711394496051 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 0.554350228628563 bayes_pls_golite062009
hormone binding 0.49524185948356 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.46168925186147 bayes_pls_golite062009
mercury ion binding 0.422648223099629 bayes_pls_golite062009
protein kinase binding 0.405060010394646 bayes_pls_golite062009
phosphoinositide 3-kinase binding 0.385979225294761 bayes_pls_golite062009
transcription factor binding 0.351817417240109 bayes_pls_golite062009
pattern binding 0.31156427047296 bayes_pls_golite062009
interleukin-7 binding 0.252985897938469 bayes_pls_golite062009
insulin receptor activity 0.216119401508389 bayes_pls_golite062009
growth hormone receptor activity 0.179919001520689 bayes_pls_golite062009
protein heterodimerization activity 0.1430595594485 bayes_pls_golite062009
interleukin-12 binding 0.12490373364175 bayes_pls_golite062009
protein homodimerization activity 0.116391819218123 bayes_pls_golite062009
integrin binding 0.0873424694168858 bayes_pls_golite062009
transcription cofactor activity 0.0819151474172926 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [452-773]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAFAGEANCD RWEFPRYRLK FFNILGEGAF GQVWRCEATN INGNEGITTV AVKTLKESAT  60
   61 EVDRKDLLSE LEVMKSLEPH INVVHLLGCC TDKDPTFVIL EYVNRGKLQT YLRSSRAERH 120
  121 YGNTHGKSNV LTSCDLTSFM YQVAKGMDYL TSRGIIHRDL AARNILITDD HTCKVADFGF 180
  181 ARDVITSKIY ERKSEGKLPI RWMATESLYD NIFSVKSDIW SFGILMWEIV TLGSTPYPGI 240
  241 SAADVMRKVR DGYRLEKPEH CRRELYNIMY YCWSHDPQER PLFAEIIQML DKLLHTEMDY 300
  301 IELERFPDHN YYNIVSLSGE KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.09691
Match: 2pvfA
Description: No description for 2pvfA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle