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View Structure Prediction Details

Protein: CG13604-PA
Organism: Drosophila melanogaster
Length: 751 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13604-PA.

Description E-value Query
Range
Subject
Range
gi|54638533, gi|... - gi|54638533|gb|EAL27935.1| GA12397 [Drosophila pseudoobscura pseudoobscura], gi|125775081|ref|XP_001...
gi|125775081|ref... - GA12397-PA [Drosophila pseudoobscura], GA12397 [Drosophila pseudoobscura pseudoobscura]
538.0 [0..1] [751..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLPPRKSQ TPTRICISKQ HLTPLQTLLQ MGFPRHRAEK ALASTGNRGV QIASDWLLAH  60
   61 VNDGTLDECA PREYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.045757
Match: 1vekA
Description: Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [76-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IYACPTGPFL QQLEEFWAKS RQMCGWNGAH NYVPHITLVS FFKAPDECSL QLSKALKQVV  60
   61 DMTGALLDRP LKLEPYMSQN FMGFFVAEED ANYLKRLALQ YVKEVSNSII SDTY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.51
Match: 2d4gA
Description: No description for 2d4gA was found.

Predicted Domain #3
Region A:
Residues: [190-636]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQLDAIVACF PWCGAVSSGT RCIPRSSRSI SLEPHVKSLH LTLAYQFPQA QFNALKALVE  60
   61 TLDASCASNW ELRLYSRDPR LATKQVQKVV YPHNPHETDE LELRIGDYIY LNTEVVDSSS 120
  121 DGWAEGISWL TGSTGHLPVN YTERTAESDA WTLHRVVQLS KSVASSLTSA EDLDIVDGRS 180
  181 ISTEPDDRQN TAHPDIIEGS SFEESEQSVE KYLRQTLKPC LELPSVQLLN SHNLTHQHNP 240
  241 NTPTIEITTN MSSSSTSMSK QPVDEILVEP PAAQPPRPDD TLSVHSDHSL HPGSLDASHA 300
  301 KNRKIYIMRH GERVDFTFGT WIPYCFDEFG NYMRKDLNMP KTLPRRKNSP EGWQNDSPLT 360
  361 NVGVYQANLI GQALLEAQVQ IDHVYCSPSY RCIQTCTSAL EGLKLTGKQK IKLEPGLFEW 420
  421 MAWYPSGVPD WLTKNELTEA KFDVDLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.39794
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.686492203566958 bayes_pls_golite062009
transferase activity 0.66841261245817 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.66326000691279 bayes_pls_golite062009
kinase activity 0.65753777854807 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.64444215862273 bayes_pls_golite062009
protein kinase activity 0.56587465829201 bayes_pls_golite062009
binding 0.0554152720226 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [637-751]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YEPVQPASEL TARLKESTEQ FYERNHDVIL QLLEQTTGNI LVVAHATTLD TCSRQLTGGV  60
   61 PRSTNELRQV IHKIPYCSLA TVEQVDGVWK LVEPECLPVT HSKNPRFEWN ALSAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.045757
Match: 2ikqA
Description: No description for 2ikqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle