| Protein: | pnt-PC |
| Organism: | Drosophila melanogaster |
| Length: | 623 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pnt-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..303] | [622..144] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MPPSAFLVNA SIISAANALD SDKEQQLQEH LNQSHFTSSS SSSNSSNNNN CHTAPNYNMV 60
61 LQSYENYPSY HLAQHHHHHH HHHSHPHHQL AQ
|
| Detection Method: |  |
| Confidence: | 1.16 |
| Match: | 2odjA |
| Description: | No description for 2odjA was found. |
|
Region A: Residues: [93-175] |
1 11 21 31 41 51
| | | | | |
1 QTGLHSHHTM QQQLQQQQQS LLLQHPQQQQ QQHSHQSQQQ QQHGYGSSAQ LPHHRLSGGS 60
61 TGSTTTTSSG SSSSGSSSSA SSQ
|
| Detection Method: | |
| Confidence: | 1.24 |
| Match: | 2apoA |
| Description: | Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [176-357] |
1 11 21 31 41 51
| | | | | |
1 GFANGSATAN NLVGALSSST AASLGLGYFN DMAPFVGDAN AYYTDSDVNF FSSGYNTSNT 60
61 HDRINNSTPP QQQQSQQPTV NGSGSASSNN NNSMLPPAVQ QSNNENNNTS SSNTNNSSNN 120
121 NNNSGGSNNS NAGSNNNNNN NNNINFMAAA AIFQHHLKEE PGTQNGNIGG YGGGSNSQND 180
181 PT
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [358-446] |
1 11 21 31 41 51
| | | | | |
1 DLSSYGLPAH LAAYGGGSGS GPTGGRSSGG GGDESDYHST ISAQDHQSQQ SSGGNGSGGA 60
61 SGGSTGNSNG YLDSSSEFYG SYAGRNRFH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [447-623] |
1 11 21 31 41 51
| | | | | |
1 DGYPPEFTPY DAQSFQSMGP QPTAMDQWGA AHAHQHPAAY MSTLGLDKGL LGGYTTQGGV 60
61 PCFTGSGPIQ LWQFLLELLL DKTCQSFISW TGDGWEFKLT DPDEVARRWG IRKNKPKMNY 120
121 EKLSRGLRYY YDKNIIHKTA GKRYVYRFVC DLQNLVGHTP EELVAKYDLK IEKKDVD
|
| Detection Method: | |
| Confidence: | 59.0 |
| Match: | 1gvjA |
| Description: | ETS-1 DNA BINDING AND AUTOINHIBITORY DOMAINS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.69183445184264 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
