| Protein: | sav-PA |
| Organism: | Drosophila melanogaster |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sav-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
257.0 | [0..1] | [592..1] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MNYLTILLCN RKPTMLSRRN KEKSQHKEGV VGKYMKKDTP PDISVINVWS DQRAKKKSLQ 60
61 RCASTSPSCE FHPRSSSTSR NTY
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [84-235] |
1 11 21 31 41 51
| | | | | |
1 SCTDSQPDYY HARRAQSQMP LQQHSHSHPH SLPHPSHPHV RSHPPLPPHQ FRASSNQLSQ 60
61 NSSNYVNFEQ IERMRRQQSS PLLQTTSSPA PGAGGFQRSY STTQRQHHPH LGGDSYDADQ 120
121 GLLSASYANM LQLPQRPHSP AHYAVPPQQQ QH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [236-394] |
1 11 21 31 41 51
| | | | | |
1 PQIHQQHAST PFGSTLRFDR AAMSIRERQP RYQPTSSPMQ QQQQQQQQQQ QQLQHTQLAA 60
61 HLGGSYSSDS YPIYENPSRV ISMRATQSQR SESPIYSNTT ASSATLAVVP QHHHQGHLAV 120
121 PSGSGGGSLS GSGRGGSSGS VRGASTSVQS LYVPPRTPP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [395-536] |
1 11 21 31 41 51
| | | | | |
1 SAVAGAGGSA NGSLQKVPSQ QSLTEPEELP LPPGWATQYT LHGRKYYIDH NAHTTHWNHP 60
61 LEREGLPVGW RRVVSKMHGT YYENQYTGQS QRQHPCLTSY YVYTTSAEPP KAIRPEASLY 120
121 APPTHTHNAL VPANPYLLEE IP
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1tk7A |
| Description: | NMR structure of WW domains (WW3-4) from Suppressor of Deltex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.80100608992875 | bayes_pls_golite062009 |
| binding | 1.28256682962994 | bayes_pls_golite062009 |
| transcription activator activity | 0.42234724730235 | bayes_pls_golite062009 |
| transcription factor binding | 0.0726503146527797 | bayes_pls_golite062009 |
|
Region A: Residues: [537-608] |
1 11 21 31 41 51
| | | | | |
1 KWLAVYSEAD SSKDHLLQFN MFSLPELEGF DSMLVRLFKQ ELGTIVGFYE RYRRALILEK 60
61 NRRAGQNQNQ NQ
|
| Detection Method: | |
| Confidence: | 17.30103 |
| Match: | 1zvdA |
| Description: | Regulation of Smurf2 Ubiquitin Ligase Activity by Anchoring the E2 to the HECT domain |
Matching Structure (courtesy of the PDB): |
|
