YRC Public Data Repository - Protein Structure Prediction

Protein:	Det-PA
Organism:	Drosophila melanogaster
Length:	153 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Det-PA.

Description	E-value	Query Range	Subject Range
gi\|114158628, gi... - gi\|77744923\|gb\|ABB02415.1\| baculoviral IAP repeat-containing 2 [Canis familiaris], gi\|114158628\|ref\|...	162.0	[0..2]	[148..222]
gi\|84579227 - gi\|84579227\|dbj\|BAE73047.1\| hypothetical protein [Macaca fascicularis]	161.0	[0..2]	[148..7]
gi\|109108444 - gi\|109108444\|ref\|XP_001096543.1\| PREDICTED: baculoviral IAP repeat-containing protein 2 isoform 1 [M...	160.0	[0..2]	[148..7]
gi\|114640071 - gi\|114640071\|ref\|XP_508720.2\| PREDICTED: baculoviral IAP repeat-containing protein 2 isoform 5 [Pan ...	159.0	[0..2]	[148..194]
gi\|25140579 - gi\|25140579\|gb\|AAN73272.1\|AF207599_1 pRb-interacting protein RbBP-36 [Homo sapiens]	159.0	[0..2]	[148..243]

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Predicted Domain #1

Region A:
Residues: [1-153]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPVVNEVA ASLGGEKLEV FRKLNLLEQH RVESYKSWPF PETASCSISK MAEAGFYWTG  60
   61 TKRENDTATC FVCGKTLDGW EPEDDPWKEH VKHAPQCEFA KLSCPERNLT VSQFLEILGT 120
  121 VVKGSIEKTC KAFKSSFVRE NEKRLDEFTR NQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.69897
Match:	1f3hA
Description:	Anti-apoptotic protein survivin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.131502804004452	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: