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View Structure Prediction Details

Protein: Dip-B-PA, Dip-B-...
Organism: Drosophila melanogaster
Length: 508 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dip-B-PA, Dip-B-....

Description E-value Query
Range
Subject
Range
AMPA_SHEDO - Probable cytosol aminopeptidase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 1501...
526.0 [0..18] [508..9]

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Predicted Domain #1
Region A:
Residues: [1-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIEKILPCT LRLNKLMSLA GNDCLCIIDR NAVPNELKAT FEEHRKFDKS FDSSISCFKV  60
   61 PNVDQPVVYA PVSELTDYDD VRSYQEAAKR SMEKVLKAGF HTPLLFVPKV KRFPEVELCT 120
  121 VLGALEQLYV PIQLREAGTL KDPRVTTLSV QIDDPRAEAI FQEALILEAG RFVARDIGVG 180
  181 DPERMTPIQV EKYIKPLFDK LNVNVISDTQ VLQKEYPLFA AVNRAADAVE RHRGRIIFLE 240
  241 YKPPKPARKT LMLVGKGVTY DTGGADIKAG GVMAGMSRDK CGAAAVAGFM QVVSQLQPDD 300
  301 IHVVAALCMV RNSVGEECYV ADEVITSRAG LHVRIGNTDA EGRMCMTDAL CRMKELVVEQ 360
  361 NLPDPHLFTI ATLTGHAFIS AGEGQSIAID NSVAHREDHA RRLQAAGQAF GEPFEVSILR 420
  421 PSDFSFNAGK VIGEDLVQAN NAPSVRTPRG HQVPAAFMIK ASGLDKHGLD SMLPIKYTHI 480
  481 DIAGSAGEHP AMPTAAPLVS LVKTHLQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 144.0
Match: 1gytA
Description: Leucine aminopeptidase, C-terminal domain; Leucine aminopeptidase (Aminopeptidase A), N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.33046421415418 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.92029075689694 bayes_pls_golite062009
exopeptidase activity 1.92607656615233 bayes_pls_golite062009
metallopeptidase activity 1.36622846208556 bayes_pls_golite062009
carboxypeptidase activity 1.26773013808101 bayes_pls_golite062009
metalloexopeptidase activity 0.675221914435689 bayes_pls_golite062009
catalytic activity 0.539156541742258 bayes_pls_golite062009
metallocarboxypeptidase activity 0.406156022753981 bayes_pls_golite062009
hydrolase activity 0.257132806706163 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle