| Protein: | Vps16A-PA |
| Organism: | Drosophila melanogaster |
| Length: | 833 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vps16A-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1003.0 | [0..3] | [833..1] |
|
Region A: Residues: [1-594] |
1 11 21 31 41 51
| | | | | |
1 MPIMYNTGEW FKVRPDYYRK VELATPDWPL DLDLEYMWVE VAPYGGPLAV TRDPTKLVPV 60
61 KGNARPMIRI FDTTGREMGH ILWNHGKLIA MGWSDMEELI CIQENATVFV YDMFGREKES 120
121 YSIGDEASVT KIVEGKVFQS SAGTGVAVMT TSGRVFLKQN SSKTERKLPD IPNSSMNCSC 180
181 WEIVTEGRNS YCLLGRDREV IKLFPGETVG TITANLFEKP HERIIKISVS YNHQHLALYT 240
241 NTGLLWLGSV DMRQKYCEFD TGRKDMPLQM EWIMNSDNSE ADAVVISYPS YLLIVNRNAD 300
301 RSDFPYDPVM FLVAEMDGVR IITQSSHEII QRLPKCVENI FAVNSQEPAS YLFEAQKKFE 360
361 EKSYKSDEYL SMCREKIDLA VSECIEAASY EFCPETQKSL LRTAYFGKGF IRNHNPDEYM 420
421 RIMRILRVLN TLRHERIAMP ITFKQFSHLN TEVILSRLVF RKHYAIAIQV AKHLNLPESW 480
481 ILEHWAYHKV MNDPNDTEVA RKITEKFKNP SVEGISFCNI ASKAHQAGRD DLAIKLLELE 540
541 SRASLHVPLL LKMRKFDRAV GSATQSGDTE LITQVLLEMK MHMMLSNLHM TIRD
|
| Detection Method: |  |
| Confidence: | 2.98 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 2.36802077000866 | bayes_pls_golite062009 |
| binding | 2.23598589443994 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.1136449999874 | bayes_pls_golite062009 |
| transporter activity | 1.23232041140488 | bayes_pls_golite062009 |
| protein binding | 1.16796757764458 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.750051725890322 | bayes_pls_golite062009 |
| actin filament binding | 0.680577261614999 | bayes_pls_golite062009 |
| hydrolase activity | 0.346903609858078 | bayes_pls_golite062009 |
| tubulin binding | 0.291956397524181 | bayes_pls_golite062009 |
| microtubule binding | 0.213830210314093 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0245411309982146 | bayes_pls_golite062009 |
|
Region A: Residues: [595-833] |
1 11 21 31 41 51
| | | | | |
1 HPLALNIYKK IMRESNRAGL YGIYNTEDDQ KAIAEYHFQN AIETEGLESN LSMIGNAYAQ 60
61 GRCTLEAELC ADTSRLIKLQ KTLSTKYNVS LNGLSIHETI QELLLIGELK EAERIRSEFK 120
121 VPDRRFWWLR ILTLSSQHKW EELEKLAKSK KSPIGYDPFV EVCLKQDNVM EARKYIPRCR 180
181 DNRRVVWYMR ANLFNEAIDS AFEQRDVHSL FELQKNQAIV NNGTLLSKVC DCIAMLEGK
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1xi4A |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
