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View Structure Prediction Details

Protein: gi|23170756, gi|...
Organism: Drosophila melanogaster
Length: 643 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23170756, gi|....

Description E-value Query
Range
Subject
Range
CG11984-PD, CG11... - This gene is referred to in FlyBase by the symbol Dmel\CG11984 (CG11984, FBgn0037655). It is a prote...
418.0 [0..1] [643..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRHEGVSCD SCLKSNFNGR RYKCLICYDY DLCADCYEDG VTSTRHLVEH PMQCILTRSD  60
   61 IELYFGGEML ASDQP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 2dipA
Description: No description for 2dipA was found.

Predicted functions:

Term Confidence Notes
binding 0.0938889867773109 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [76-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSFTCPYCKK MGFSDATLLE HVSAEHTETS LEVVCPVCAG LPGGEPNLVT DDFAGHLTLE  60
   61 HRQGPRELIS FLISFFKQTH HTLIARNAQL 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 2ghfA
Description: No description for 2ghfA was found.

Predicted Domain #3
Region A:
Residues: [166-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPYKRLVLAS YKYKSNHLVA LTCRQYDEPS AIRHGGGVRR IPGRTLGGPR TRRSNMHFSS  60
   61 SSGLSALSPS GRESVDPIAE LLSQLSGV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [254-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRGGPPTSQL QQLQMQMQLD RQQVTASRQI DRLPRRAHPI VSTSNSNAAM AEVISGGAGG  60
   61 SGGSGAVGSG SGGGSGATAP PNLRTTEWPV TASFSTSASN HSQTQSSLAA NSLNAREAIG 120
  121 TSSSAGSNVL GISVGVGGTA NGNGGAGSSG VATGAGGAGQ GGG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [417-643]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGGAAAGESF LLAQFMQPTF TEAEWAVVES MRADRSMFVQ SLMLSMLCTE ALDLNASDES  60
   61 LAKSDNVNKG QQQQQEDAEA EAQAETLLNN NADVEQQQQQ QQLQPAMVRQ VNQMQQTSPE 120
  121 DFVCDEYRYK NKKANTTQTS GTGGLGGAGA TAAPGGGASG AGTKPTADRG IERRSGRPPP 180
  181 GEMATGSQQP QQQQQSTANP AASQQKYKQN ASAATAAGNT NQIPDTR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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