YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|10726382, gi|...
Organism: Drosophila melanogaster
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10726382, gi|....

Description E-value Query
Range
Subject
Range
gi|109089332 - gi|109089332|ref|XP_001103971.1| PREDICTED: procollagen-proline, 2-oxoglutarate 4-dioxygenase (proli...
428.0 [0..6] [389..13]

Back

Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENNNPELIV LKSYAASTME LMKLLEVEDE LVDNLKGYVK TLKMKFNLME RSLIDMSREN  60
   61 MEMKRHIENA RLMRKMLPTS SDLQQACRGI HDLMSFYDLK PEELAAGNLA GYSQPGTG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.148742
Match: PF08336.2
Description: No description for PF08336.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTAYDCLALG EFSVQKREDD LAEAWYNLSL IRFENKFDKY RVHKAWGLLL AKNKQLTDAF  60
   61 YHFENKPEGI IASNEVIHFK EELSTKQNCA VVVQKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.522879
Match: 1tjcA
Description: Crystal structure of peptide-substrate-binding domain of human type I collagen prolyl 4-hydroxylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
procollagen-proline 4-dioxygenase activity 7.0422525853653 bayes_pls_golite062009
procollagen-proline dioxygenase activity 7.0422525853653 bayes_pls_golite062009
peptidyl-proline dioxygenase activity 7.0422525853653 bayes_pls_golite062009
peptidyl-proline 4-dioxygenase activity 7.0422525853653 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 5.01373106146099 bayes_pls_golite062009
binding 1.69757163267229 bayes_pls_golite062009
protein binding 1.6117248230768 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [215-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRLHCRYNTT TTPFTRIAPL KMEELGLDPY MVVFHDVIYD TEIDGMLNSS NFGLSLTDSG  60
   61 QKSEVRTSKD SYIVDAKTLN ERVTDMTGFS MEMSDPFSLI NYGLGGHYML HYDFHEYTNT 120
  121 LGEVDSGGAT IFPMINITVT PKKGSAVFWY NLHNSGAMNL KSLHSACPVI SGSKYGEL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.08
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle