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View Structure Prediction Details

Protein: Tom34-PA
Organism: Drosophila melanogaster
Length: 947 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Tom34-PA.

Description E-value Query
Range
Subject
Range
gi|15292599 - gi|15292599|gb|AAK93568.1| SD10334p [Drosophila melanogaster]
457.0 [0..12] [947..12]

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Predicted Domain #1
Region A:
Residues: [1-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNTINSEEV SDAGSYKDKG NEAFKASRWE EAVEHYGKAI KAGSKHKELA VFYKNRAAAY  60
   61 LKLGKYENAV EDCTESLKAA PGDPKALFRR AQAYEALEKF EEAYKDATAL FKADPGNKTV 120
  121 QPMLQRLHVV VEERSARNAK TSTKVKQMMD LTFDLATPID KRRAAANNLV VLAKEQTGAE 180
  181 LLYKDHCIAK VASLTKVEKD QDIYVNMVHL VAALCENSVE RTKGVLTELG VPWFMRVLDQ 240
  241 KHENCVSTAQ FCLQTILNAL SGLKNKPDSK PEKELCTRNN REIDTLLTCL VYSITDRTIS 300
  301 GAARDGVIEL ITRNVHYTAL EWAERLVEIR GLCRLLDVCS ELEDYKYESA MDITGSSSTI 360
  361 ASVCLARIYE NMYYDEAKAR FTDQIDEYIK DKLLAPDMES KVRVTVAITA LLNGPLDVGN 420
  421 QVVAREGILQ MILAMATTDD ELQQRVSCEC LIAASSKKDK AKALCEQGVD ILKRLYH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.154902
Match: 1wao1
Description: PP5 structure
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of muscle 2.91086263632625 bayes_pls_golite062009
binding 2.09193012129784 bayes_pls_golite062009
protein binding 1.52807685989528 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.09206313505563 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.855511277899989 bayes_pls_golite062009
phosphatase activity 0.709873667529051 bayes_pls_golite062009
phosphoprotein phosphatase activity 0.521298686118866 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [478-947]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKNDGIRVRA LVGLCKLGSY GGQDAAIRPF GDGAALKLAE ACRRFLIKPG KDKDIRRWAA  60
   61 DGLAYLTLDA ECKEKLIEDK ASIHALMDLA RGGNQSCLYG VVTTFVNLCN AYEKQEMLPE 120
  121 MIELAKFAKQ HIPEEHELDD VDFINKRITV LANEGITTAL CALAKTESHN SQELIARVLN 180
  181 AVCGLKELRG KVVQEGGVKA LLRMALEGTE KGKRHATQAL ARIGITINPE VSFSGQRSLD 240
  241 VIRPLLNLLQ QDCTALENFE SLMALTNLAS MNESVRQRII KEQGVSKIEY YLMEDHLYLT 300
  301 RAAAQCLCNL VMSEDVIKMF EGNNDRVKFL ALLCEDEDEE TATACAGALA IITSVSVKCC 360
  361 EKILAIASWL DILHTLIANP SPAVQHRGIV IILNMINAGE EIAKKLFETD IMELLSGLGQ 420
  421 LPDDTRAKAR EVATQCLAAA ERYRIIERSD NAEIPDVFAE NSKISEIIDD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.154902
Match: 1ialA
Description: Importin alpha
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.4389817190572 bayes_pls_golite062009
protein binding 1.63705839411934 bayes_pls_golite062009
substrate-specific transporter activity 1.01396453014861 bayes_pls_golite062009
cytoskeletal protein binding 0.773975545005505 bayes_pls_golite062009
actin binding 0.572473732371314 bayes_pls_golite062009
nucleic acid binding 0.294257360897755 bayes_pls_golite062009
RNA binding 0.0287526191298597 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle