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View Structure Prediction Details

Protein: mRpS9-PA
Organism: Drosophila melanogaster
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpS9-PA.

Description E-value Query
Range
Subject
Range
RT09_BOVIN - (Q58DQ5) 28S ribosomal protein S9, mitochondrial precursor (S9mt) (MRP-S9)
510.0 [0..24] [395..25]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRVFGLNI VKNNRNLLQN ACKSRAPMPC YMAAAPFATD VTVQAAPAAV QKQRVSKAMR  60
   61 AYLKRATEHD EFMKTQHLEF QIGKRHLANM MGADAETFTQ EDIDEAISYL FPSGLYDQKA 120
  121 RPAMKSPEVV FPARKAAEFD ETGRPFHSMF YTGKPNFFQL LH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIVEETNKLA DLEERMLRRG NKPDENQKLE IAGFQLLPKD QLELLLVESI ADIEYSNFTN  60
   61 SMDRLIASPY AYKSKAFIER YMKPLMDQSK QLEVPKPRID EEG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [266-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQYITTYECL RKTARADVTV RLPGTGKISI NGKDISYFED ENCREQLLFP LQFSELLGKV  60
   61 DVEANVEGGG PSGQAGAIRW GIAMSLRSFV DQEMIESMRL AGLLTRDYRR RERKKFGQEG 120
  121 ARRKYTWKKR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 1vs5I
Description: No description for 1vs5I was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle