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View Structure Prediction Details

Protein: mRpS9-PA
Organism: Drosophila melanogaster
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpS9-PA.

Description E-value Query
Range
Subject
Range
RT09_BOVIN - (Q58DQ5) 28S ribosomal protein S9, mitochondrial precursor (S9mt) (MRP-S9)
510.0 [0..24] [395..25]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRVFGLNI VKNNRNLLQN ACKSRAPMPC YMAAAPFATD VTVQAAPAAV QKQRVSKAMR  60
   61 AYLKRATEHD EFMKTQHLEF QIGKRHLANM MGADAETFTQ EDIDEAISYL FPSGLYDQKA 120
  121 RPAMKSPEVV FPARKAAEFD ETGRPFHSMF YTGKPNFFQL LH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIVEETNKLA DLEERMLRRG NKPDENQKLE IAGFQLLPKD QLELLLVESI ADIEYSNFTN  60
   61 SMDRLIASPY AYKSKAFIER YMKPLMDQSK QLEVPKPRID EEG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [266-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQYITTYECL RKTARADVTV RLPGTGKISI NGKDISYFED ENCREQLLFP LQFSELLGKV  60
   61 DVEANVEGGG PSGQAGAIRW GIAMSLRSFV DQEMIESMRL AGLLTRDYRR RERKKFGQEG 120
  121 ARRKYTWKKR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 1vs5I
Description: No description for 1vs5I was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle