| Protein: | MTA1-like-PB |
| Organism: | Drosophila melanogaster |
| Length: | 844 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTA1-like-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
645.0 | [0..1] | [844..1] |
|
Region A: Residues: [1-215] |
1 11 21 31 41 51
| | | | | |
1 MATNMYRVGD YVYVETTPNS PYLIRRIEEL NKNQTGNVEA KVMCFYRRRD LPNPLVQLAD 60
61 KHQPALDEER TSPTQTSGGG GSATGNSGSN SSGTSNNNSS STAIGGGAGG SGGAGGDAEK 120
121 GEALTSKQRY QIKHRELFLS RQVESIPATQ IRGKCSVTLL NETESLQSYL NKDDTFFYCL 180
181 VFDPNQKTLL ADKGEIRVGS RYQCDIPAKL KDTAT
|
| Detection Method: |  |
| Confidence: | 2.72 |
| Match: | 1w4sA |
| Description: | Crystal structure of the proximal BAH domain of polybromo |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [216-322] |
1 11 21 31 41 51
| | | | | |
1 DDRKLEELES LVWTPEHSLT DRKIDQFLVV SRSIGTFARA LDCSSSVKQP SLHMSAAAAS 60
61 RDITLFHAMN ILHKHEYSIE ESMSSLVPST GPVLCRDEIE DWSASEA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [323-372] |
1 11 21 31 41 51
| | | | | |
1 NLFEEALEKY GKDFNDIRQD FLPWKTLKQI IEYYYMWKTT DRYVQQKRVK
|
| Detection Method: | |
| Confidence: | 19.221849 |
| Match: | 2crgA |
| Description: | Solution structure of the myb-like DNA-binding domain of mouse MTA3 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.87991790206998 | bayes_pls_golite062009 |
| transcription regulator activity | 2.122580758085 | bayes_pls_golite062009 |
| DNA binding | 1.98453325263719 | bayes_pls_golite062009 |
| nucleic acid binding | 1.93681952439958 | bayes_pls_golite062009 |
| transcription factor activity | 1.36872096268289 | bayes_pls_golite062009 |
| protein deacetylase activity | 1.30097338817679 | bayes_pls_golite062009 |
| histone deacetylase activity | 1.21500914041004 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.09150919349912 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.03881604759993 | bayes_pls_golite062009 |
| protein binding | 1.03780839342631 | bayes_pls_golite062009 |
| deacetylase activity | 0.690301184840273 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.187173982490585 | bayes_pls_golite062009 |
| transcription activator activity | 0.174325083775401 | bayes_pls_golite062009 |
| transcription factor binding | 0.14097776282047 | bayes_pls_golite062009 |
| chromatin binding | 0.123933030155299 | bayes_pls_golite062009 |
|
Region A: Residues: [373-604] |
1 11 21 31 41 51
| | | | | |
1 AVEAELKLKQ VYIPQYNNNG KGNGTSTKAG GGIYNGTTNG STDLSSNGKP CESCGTTKSS 60
61 QWNSVSSGHS TSRLCLSCWE YWRRYGSMKS ATKGDAGEGD AKKKSSSAAS TPTATLAGLA 120
121 TTPTAVVDLN DDEKISDLTN RQLHRCSIVN CGKEFKLKTH LARHYAQAHG IAISSGSPRP 180
181 IMKTRTAFYL HTNPMTRVAR AICRSIVKPK KAARQSAYAI NAMLVKQEFT NR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [605-764] |
1 11 21 31 41 51
| | | | | |
1 ISGKSQAEIK KLLLLKPKDR GSVTKIANRL GAPGSGPHEW LVLTPKDKMP LPAVVSFPKP 60
61 PKAPDGSLVY DRVPNKSPDV VAVPADKELT IIPTQATSTI RKRAHEDQQL NGTEVTIVPS 120
121 GPPAKRPNKD PMPSHCPSPE QFAAMMAASG QPLSRHHLNG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [765-844] |
1 11 21 31 41 51
| | | | | |
1 KQKIAQMARG GNGRKQVISW MDAPDDVYFR ANDTHKKTRK ILSAVDLRRA ARKPWRTLPI 60
61 KPAAPEPSSR PIESQIVILD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
