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View Structure Prediction Details

Protein: l(3)82Fd-PN, l(3...
Organism: Drosophila melanogaster
Length: 1270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(3)82Fd-PN, l(3....

Description E-value Query
Range
Subject
Range
l(3)82Fd-PP - The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It i...
626.0 [0..1] [1270..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIIDSGKYR LRKDWASASI PSLVNIDEHD GDSGDTEGSL NATAPLPPQK PPRRSSLALG  60
   61 LFSSKSDKSQ KRRSSIAVSF LRRDSSKNST KDSYESAVRS EKSDGSGTPT SP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EIVYSSEENI RASSPNDPGK QTFFEDGSQS PRPVLQGLNT SYEGPQNDRQ RRRRSSLQTK  60
   61 LDRHRRKKME YSNQRSLDSG MMCSESHSDL TNDSLAEGSG SFANRSRNGN DDEDDIIDPS 120
  121 HGEYFPREKR HSWWNIFVPD NFKNRSRRAS QDVSSLSRSV DNLAIPV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [280-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRSKSRSVDH GLAAPFDLDS LRSKVEQRFE SVDKLSRQKS SLPTIPTISY TVGNRDTLTS  60
   61 VAARFDTTPS ELTHLNRLNS SFIYPGQQLL VPDKSAKDDA SSSSTHDADG ASLSG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.31
Match: 2djpA
Description: No description for 2djpA was found.

Predicted Domain #4
Region A:
Residues: [395-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSSPVERKLS GDESREKDIL EGLRPGSPKP GHIERVGGSS QQQQAEEEAN KSDDPVITQR  60
   61 FLKINVRHIT DGQGVVGGVL LVTPNAVMFD PNVSDPLVIE HGPESYGVIA PMELVVNAAI 120
  121 FHDIAHMRVA GGAGQGLNSA SGDAEKPEIY YPKPVLVEED SKELPEQQSL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [565-713]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGEDGNKRLD AEIGSLEIAD DQESLCSSTG RDGDAFPKAF DRERVEDSSM EAKDSAKTDA  60
   61 LDDEDKKAGL GLSSTRSTLE ERRKSLLDHH WAIPSKDRSS EDEGDNESNV TVDSGARVQD 120
  121 PHSANSSVSG VPLSQPPVAA AAAAAAVAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [714-930]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASAVVPLPPS GIDLEHLEQL SKQSCYDSGI DIREPVPNVQ PIPKKTVYSD ADIVLSSDWV  60
   61 PPKTIVPTHF SESPPRSTIL GQSLDAGTGG AGGVRKKTSS VSFSVDDEAA QQAQAQSAAL 120
  121 AVTDKQADKK NKMLKRLSYP LTWVEGLTGE GGAVPPGGVG SGSLNKSGDT DSAPNTGDSN 180
  181 QSVFSKVFSR RSSIGTFIRP HSSEGTSSST KLKEAKQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [931-1104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APKLDYRSMV SMDDKPELFI SVDKLIPRPA RACLDPPLYL RLRMGKPIGK AIPLPTSVMS  60
   61 YGKNKLRAEY WFSVPKNRVD ELYRFINTWV KHLYGELDEE QIKARGFELI QEDTEWTKSG 120
  121 TTKAGMGGGS QDGEEISDLT RESWEVLSMS TDEYRKTSLF ATGSFDLDFP IPDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1105-1270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGKTEILTEE HREKLCSHLP ARAEGYSWSL IFSTSQHGFA LNSLYRKMAR LESPVLIVIE  60
   61 DTEHNVFGAL TSCSLHVSDH FYGTGESLLY KFNPSFKVFH WTGENMYFIK GNMESLSIGA 120
  121 GDGRFGLWLD GDLNQGRSQQ CSTYGNEPLA PQEDFVIKTL ECWAFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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