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View Structure Prediction Details

Protein: l(3)82Fd-PN, l(3...
Organism: Drosophila melanogaster
Length: 1270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(3)82Fd-PN, l(3....

Description E-value Query
Range
Subject
Range
l(3)82Fd-PP - The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It i...
626.0 [0..1] [1270..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIIDSGKYR LRKDWASASI PSLVNIDEHD GDSGDTEGSL NATAPLPPQK PPRRSSLALG  60
   61 LFSSKSDKSQ KRRSSIAVSF LRRDSSKNST KDSYESAVRS EKSDGSGTPT SP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EIVYSSEENI RASSPNDPGK QTFFEDGSQS PRPVLQGLNT SYEGPQNDRQ RRRRSSLQTK  60
   61 LDRHRRKKME YSNQRSLDSG MMCSESHSDL TNDSLAEGSG SFANRSRNGN DDEDDIIDPS 120
  121 HGEYFPREKR HSWWNIFVPD NFKNRSRRAS QDVSSLSRSV DNLAIPV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [280-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRSKSRSVDH GLAAPFDLDS LRSKVEQRFE SVDKLSRQKS SLPTIPTISY TVGNRDTLTS  60
   61 VAARFDTTPS ELTHLNRLNS SFIYPGQQLL VPDKSAKDDA SSSSTHDADG ASLSG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.31
Match: 2djpA
Description: No description for 2djpA was found.

Predicted Domain #4
Region A:
Residues: [395-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSSPVERKLS GDESREKDIL EGLRPGSPKP GHIERVGGSS QQQQAEEEAN KSDDPVITQR  60
   61 FLKINVRHIT DGQGVVGGVL LVTPNAVMFD PNVSDPLVIE HGPESYGVIA PMELVVNAAI 120
  121 FHDIAHMRVA GGAGQGLNSA SGDAEKPEIY YPKPVLVEED SKELPEQQSL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [565-713]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGEDGNKRLD AEIGSLEIAD DQESLCSSTG RDGDAFPKAF DRERVEDSSM EAKDSAKTDA  60
   61 LDDEDKKAGL GLSSTRSTLE ERRKSLLDHH WAIPSKDRSS EDEGDNESNV TVDSGARVQD 120
  121 PHSANSSVSG VPLSQPPVAA AAAAAAVAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [714-930]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASAVVPLPPS GIDLEHLEQL SKQSCYDSGI DIREPVPNVQ PIPKKTVYSD ADIVLSSDWV  60
   61 PPKTIVPTHF SESPPRSTIL GQSLDAGTGG AGGVRKKTSS VSFSVDDEAA QQAQAQSAAL 120
  121 AVTDKQADKK NKMLKRLSYP LTWVEGLTGE GGAVPPGGVG SGSLNKSGDT DSAPNTGDSN 180
  181 QSVFSKVFSR RSSIGTFIRP HSSEGTSSST KLKEAKQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [931-1104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APKLDYRSMV SMDDKPELFI SVDKLIPRPA RACLDPPLYL RLRMGKPIGK AIPLPTSVMS  60
   61 YGKNKLRAEY WFSVPKNRVD ELYRFINTWV KHLYGELDEE QIKARGFELI QEDTEWTKSG 120
  121 TTKAGMGGGS QDGEEISDLT RESWEVLSMS TDEYRKTSLF ATGSFDLDFP IPDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1105-1270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGKTEILTEE HREKLCSHLP ARAEGYSWSL IFSTSQHGFA LNSLYRKMAR LESPVLIVIE  60
   61 DTEHNVFGAL TSCSLHVSDH FYGTGESLLY KFNPSFKVFH WTGENMYFIK GNMESLSIGA 120
  121 GDGRFGLWLD GDLNQGRSQQ CSTYGNEPLA PQEDFVIKTL ECWAFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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