| Protein: | PGRP-SB1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 190 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGRP-SB1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
221.0 | [0..1] | [190..1] |
|
|
212.0 | [0..1] | [187..1] |
|
|
202.0 | [0..6] | [188..1] |
|
|
195.0 | [0..6] | [190..1] |
|
|
195.0 | [0..23] | [188..210] |
|
|
194.0 | [0..4] | [190..1] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MNTSTAISFV AALVLCCLAL SANALQIEPR SSWGAVSARS PSRISGAVDY VIIHHSDNPN 60
61 GCSTSEQCKR MIKNIQSDHK GRRNFSDIGY NFIVAGDGKV YEGRGFGLQG SHSPNYNRKS 120
121 IGIVFIGNFE RSAPSAQMLQ NAKDLIELAK QRGYLKDNYT LFGHRQTKAT SCPGDALYNE 180
181 IKTWPHWRQN
|
| Detection Method: |  |
| Confidence: | 49.522879 |
| Match: | 1s2jA |
| Description: | Crystal structure of the Drosophila pattern-recognition receptor PGRP-SA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidoglycan binding | 9.32313496679335 | bayes_pls_golite062009 |
| peptidoglycan receptor activity | 6.51660037886232 | bayes_pls_golite062009 |
| pattern recognition receptor activity | 6.45255811818702 | bayes_pls_golite062009 |
| N-acetylmuramoyl-L-alanine amidase activity | 5.29207604418857 | bayes_pls_golite062009 |
| pattern binding | 4.06455798515101 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.20235326428146 | bayes_pls_golite062009 |
| receptor activity | 2.69681086194598 | bayes_pls_golite062009 |
| signal transducer activity | 2.24692953747972 | bayes_pls_golite062009 |
| molecular transducer activity | 2.24692953747972 | bayes_pls_golite062009 |
| binding | 1.78736719382897 | bayes_pls_golite062009 |
| muramyl dipeptide binding | 1.16811676642278 | bayes_pls_golite062009 |
| hydrolase activity | 1.14017500144843 | bayes_pls_golite062009 |
| 0.808368163500401 | bayes_pls_golite062009 | |
| catalytic activity | 0.628556091191359 | bayes_pls_golite062009 |
| 0.60706691535931 | bayes_pls_golite062009 | |
| protein binding | 0.175384917086218 | bayes_pls_golite062009 |
