YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0310115, FBp...
Organism:	Drosophila melanogaster
Length:	121 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310115, FBp....

Description	E-value	Query Range	Subject Range
gi\|38048453 - gi\|38048453\|gb\|AAR10129.1\| similar to Drosophila melanogaster PebIII [Drosophila yakuba]	179.0	[0..6]	[120..1]
gi\|7960304 - gi\|7960304\|gb\|AAF71289.1\|AF255918_1 chemosensory protein [Mamestra brassicae]	178.0	[0..5]	[119..1]
gi\|157125794, gi... - gi\|157125794\|ref\|XP_001660785.1\| protein serine/threonine kinase, putative [Aedes aegypti], gi\|10888...	174.0	[0..1]	[120..1]
gi\|82792665 - gi\|82792665\|gb\|ABB91378.1\| chemosensory protein [Helicoverpa assulta]	173.0	[0..5]	[119..1]
gi\|21898673 - gi\|21898673\|gb\|AAM77025.1\| chemosensory protein [Leucophaea maderae] gi\|21898673\|gb\|A... - chemosensory protein [Leucophaea maderae]	173.0	[0..5]	[119..1]
gi\|77415642 - gi\|77415642\|emb\|CAJ01490.1\| hypothetical protein [Biphyllus lunatus]	170.0	[0..1]	[120..1]
gi\|58585106, gi\|... - gi\|58585106\|ref\|NP_001011583.1\| antennal-specific protein 3c precursor [Apis mellifera], ref\|XP_3934...	170.0	[0..1]	[119..1]
gi\|77415664, gi\|... - gi\|77415664\|emb\|CAJ01501.1\| hypothetical protein [Manduca sexta], gi\|6560659\|gb\|AAF16707.1\|AF117585_...	170.0	[0..1]	[119..1]
gi\|2443450 - gi\|2443450\|gb\|AAC47827.1\| olfactory protein [Cactoblastis cactorum]	170.0	[0..1]	[119..2]

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Predicted Domain #1

Region A:
Residues: [1-121]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASLALVFC VCVGLAAAAP EKTYTNKYDS VNVDEVLGNN RVLGNYLKCL MDKGPCTAEG  60
   61 RELKRLLPDA LHSDCSKCTE VQRKNSQKVI NYLRANKAGE WKLLLNKYDP QGIYRAKHEG 120
  121 H

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.0
Match:	1k19A
Description:	Chemosensory protein Csp2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
protein kinase activity	2.32951783194389	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	1.8111480887052	bayes_pls_golite062009
kinase activity	1.72120550405242	bayes_pls_golite062009
protein serine/threonine kinase activity	1.67742609993834	bayes_pls_golite062009
binding	1.60527518960136	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.5007544588528	bayes_pls_golite062009
transferase activity	0.88554507754561	bayes_pls_golite062009
catalytic activity	0.364912245438605	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: