YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: shu-PA
Organism: Drosophila melanogaster
Length: 455 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for shu-PA.

Description E-value Query
Range
Subject
Range
gi|109474286 - gi|109474286|ref|XP_001066628.1| PREDICTED: similar to FK506-binding protein 4 (Peptidyl-prolyl cis-...
230.0 [0..2] [367..205]

Back

Predicted Domain #1
Region A:
Residues: [1-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEENFEPYTP QLLKNPLSYS DLVKKGVEFE VDNSQQNHAR DLGLDSDSDS DYEDALDVDG  60
   61 EELRSPWTYS FDELRALMSE IDENIYKRIT RTGHVDREAV PNKARVSVRY SGYWEGETAP 120
  121 FDSSLLRGSK FVFETGQGTV VEGLEVAVRS MRPYEQAEFI ISYKLLFGEL GCPPRIKPKA 180
  181 DALFKVEVID YSLIGDAKGI DAIPQEDRDK FCVVYPKAVD LHLHGKDSVK LGRYQSAATA 240
  241 FERAVSSLNY CRMANDEEER KQTELLTTLN QNLMIVYNKM NKPKRACIMM KALRHLTMGN 300
  301 PSCKALFQEG RALAALGEYN LARNAYLQAQ AKQPANKEIS DEIISMNKRI SKYEEASRDI 360
  361 WARAFSLKNS KSDVRKTPAQ LEKEAKEQDF NDKMEDLIRR FKNTSDQQVS FSRKSYSNAQ 420
  421 FDATCKLAKE HNLKLTLSPI QEDVLTLSKP DVKFA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.154902
Match: 1kt1A
Description: FKBP51, C-terminal domain; FKBP51, N-terminal domains
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
procollagen-proline 4-dioxygenase activity 6.80616214194201 bayes_pls_golite062009
peptidyl-proline 4-dioxygenase activity 6.80616214194201 bayes_pls_golite062009
peptidyl-proline dioxygenase activity 6.80616214194201 bayes_pls_golite062009
procollagen-proline dioxygenase activity 6.80616214194201 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 4.77770372249654 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 4.0615867467963 bayes_pls_golite062009
cis-trans isomerase activity 3.99265212272703 bayes_pls_golite062009
macrolide binding 2.8097578502972 bayes_pls_golite062009
FK506 binding 2.69770241359364 bayes_pls_golite062009
isomerase activity 2.31710030777753 bayes_pls_golite062009
heat shock protein binding 1.35268080101836 bayes_pls_golite062009
catalytic activity 0.885282592863018 bayes_pls_golite062009
ryanodine-sensitive calcium-release channel activity 0.753553267055211 bayes_pls_golite062009
intracellular ligand-gated calcium channel activity 0.753553267055211 bayes_pls_golite062009
binding 0.609533374908001 bayes_pls_golite062009
drug binding 0.386165046836496 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.327099943267853 bayes_pls_golite062009
transferase activity 0.31967318602798 bayes_pls_golite062009
kinase activity 0.301313235341922 bayes_pls_golite062009
unfolded protein binding 0.27473817613726 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.225873481281805 bayes_pls_golite062009
protein binding 0.021021468760355 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle