| Protein: | alphaPS5-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1000 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alphaPS5-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
670.0 | [0..2] | [989..15] |
|
Region A: Residues: [1-1000] |
1 11 21 31 41 51
| | | | | |
1 MNFSPLPNRV IDAPKHLKTR MIQVRSSYFG YSLVIRPTSI FVGAPRAQST LESQGSINET 60
61 GAVYRCPLAS GSCSHYVLND KLNKQFQWLG GSMDGGTKDT DKLLVCAPRF FVPKNKNYGQ 120
121 MRGICYWVRD TVADTPPLSD VRTISLIPSQ AEEHFMLELG LSAHVTDDNS GFLIGAPGVR 180
181 SWKGSVLVHR GEDLAAQGSY AVKMLDSWDW VKNHFTYVGY ALSSGYFSSN NRTSLLYVTT 240
241 APSSVLNTGK AYIFDVVGEI VRKLHVFHGE QLGEYFGYSV VAEDLNGDGL TDVVVSAPLN 300
301 ALGDSYDVGA IYVFINKGLF KFEKKIIRLP LSSGARFGSS LSKVGDINHD GYNDLAVGAP 360
361 FAGNGAVFIF LGSEHGLRDE PSQRLDAPSR EPGPYGAHMF GQGLSRGSDI DGNGFNDLAI 420
421 GAPGAEAVYL YRAYPVVKIH ATVRSESRAI RPEQETITVT ACYRLETTSK ARQMQQQELT 480
481 FRMTIDELLQ RVSFAPMRTN EVSFQAQAGL SGSCRNFSVG VHYTGGIFTP IDLELHYELA 540
541 KKIPHSHEAF CESCAVVDPL EPKYATGTLS FMTGCAAHVC VSDLQLSSKD VNSSFIFGSL 600
601 EVLSFSYEIT NSGEPAYVAQ FNVTSSARLP FAKVPGNCRV RHEVMLCDLN GGRALARGDS 660
661 ESLTIIFDVT QLSGQSLTIE AAVSSAGMDQ NPKDNTMSTT ISLREYAEID ASGGPIDGHI 720
721 ALKEYPYSAE VNNSYEFKSH GPSIIDELTV YVDVPIAYTV TGSAGIKSIF NISSLQMQAT 780
781 HGSELVPIKL YDQTNTLAKE YPLEDSSRRA NRKRRELQQD QYAIMPDVNI SDILTKENLP 840
841 ANRTLVLDCL RGNWTICVRS QMRVQLKPEQ PIDLRISFKV DLNDFVNTFD YLVIFTNVEM 900
901 FKEGDSTSIA LKRNLKPNVI FNYSETPLPI WYIILSLIAG HLLLGAMTYI LYKLRFFKRG 960
961 KKEELKRLLE EHRSETKEPA TDCEGNQEEI NVEMHSDLEN
|
| Detection Method: |  |
| Confidence: | 171.0 |
| Match: | 1jv2A |
| Description: | Thigh, calf-1 and calf-2 domains of integrin alpha; Integrin alpha N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cell adhesion molecule binding | 4.38909417354069 | bayes_pls_golite062009 |
| binding | 2.38505574840555 | bayes_pls_golite062009 |
| protein binding | 1.88268703782377 | bayes_pls_golite062009 |
| receptor activity | 1.69914965252002 | bayes_pls_golite062009 |
| integrin binding | 1.46467851042106 | bayes_pls_golite062009 |
| signal transducer activity | 1.45732457862434 | bayes_pls_golite062009 |
| molecular transducer activity | 1.45732457862434 | bayes_pls_golite062009 |
| laminin receptor activity | 0.57752974249266 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.339667043877566 | bayes_pls_golite062009 |
