| Protein: | FBpp0311714, twi... |
| Organism: | Drosophila melanogaster |
| Length: | 490 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311714, twi....
| Description | E-value | Query Range |
Subject Range |
|
|
282.0 | [0..1] | [490..1] |
|
Region A: Residues: [1-243] |
1 11 21 31 41 51
| | | | | |
1 MMSARSVSPK VLLDISYKPT LPNIMELQNN VIKLIQVEQQ AYMQSGYQLQ HQQQHLHSHQ 60
61 HHQQHHQQQH AQYAPLPSEY AAYGITELED TDYNIPSNEV LSTSSNQSAQ STSLELNNNN 120
121 TSSNTNSSGN NPSGFDGQAS SGSSWNEHGK RARSSGDYDC QTGGSLVMQP EHKKLIHQQQ 180
181 QQQQQHQQQI YVDYLPTTVD EVASAQSCPG VQSTCTSPQS HFDFPDEELP EHKAQVFLPL 240
241 YNN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [244-351] |
1 11 21 31 41 51
| | | | | |
1 QQQQSQQLQQ QQPHQQSHAQ MHFQNAYRQS FEGYEPANSL NGSAYSSSDR DDMEYARHNA 60
61 LSSVSDLNGG VMSPACLADD GSAGSLLDGS DAGGKAFRKP RRRLKRKP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [352-490] |
1 11 21 31 41 51
| | | | | |
1 SKTEETDEFS NQRVMANVRE RQRTQSLNDA FKSLQQIIPT LPSDKLSKIQ TLKLATRYID 60
61 FLCRMLSSSD ISLLKALEAQ GSPSAYGSAS SLLSAAANGA EADLKCLRKA NGAPIIPPEK 120
121 LSYLFGVWRM EGDAQHQKA
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1mdyA |
| Description: | Myod B/HLH domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| transcription activator activity | 3.87875547821718 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.42035985454056 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.39500382187264 | bayes_pls_golite062009 |
| protein binding | 2.64975291677725 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.42306484786159 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| transcription repressor activity | 0.955588849035129 | bayes_pls_golite062009 |
| promoter binding | 0.8576109846276 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.801830750183111 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.53175615551166 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
| protein dimerization activity | 0.20674648626116 | bayes_pls_golite062009 |
