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View Structure Prediction Details

Protein: mei-S332-PA, FBp...
Organism: Drosophila melanogaster
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mei-S332-PA, FBp....

Description E-value Query
Range
Subject
Range
gi|125811971|ref... - GA18794-PA [Drosophila pseudoobscura], GA18794 [Drosophila pseudoobscura pseudoobscura]
gi|54637240, gi|... - gi|54637240|gb|EAL26643.1| GA18794 [Drosophila pseudoobscura pseudoobscura], gi|125811971|ref|XP_001...
545.0 [0..1] [401..1]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKVEQQYK LLNAELMDQV QKQRLEIGEY RKRVISLERE IMDIREEHVL QNHRQRMENI  60
   61 SIVRSLMLSL NVDSDSLAVR QEPAPAAQIN RPSGPRRSSR EICKDMRRTC ALARTTRPIS 120
  121 PRRSSSVTST VSSTSRRSSA EVQSEVVTTR IPEDRRANKP TPPPRRPAEL VFDEDDSDDD 180
  181 FDEAVSPVEE TQTEQNEENN RLFSIIEENG SEGESTDSSS SCEAIYCDTT FESSPPNAQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [240-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTVTPSGRAL REVDTNIPVA VSLSRGKETG KGSWLAISVA VEDSPQEPSI QCPRLAVTRP  60
   61 SQSSGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [306-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPDVNGLTPR RSLFNGIGKM AGSTSTPKSF LVEEMPSIRT RSRTAANKKS ENTDMSSSFC  60
   61 NNSARPSRSC RPTSLVEPSL KNKLRNGSKG KAKAKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle