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View Structure Prediction Details

Protein: mei-S332-PA, FBp...
Organism: Drosophila melanogaster
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mei-S332-PA, FBp....

Description E-value Query
Range
Subject
Range
gi|125811971|ref... - GA18794-PA [Drosophila pseudoobscura], GA18794 [Drosophila pseudoobscura pseudoobscura]
gi|54637240, gi|... - gi|54637240|gb|EAL26643.1| GA18794 [Drosophila pseudoobscura pseudoobscura], gi|125811971|ref|XP_001...
545.0 [0..1] [401..1]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKVEQQYK LLNAELMDQV QKQRLEIGEY RKRVISLERE IMDIREEHVL QNHRQRMENI  60
   61 SIVRSLMLSL NVDSDSLAVR QEPAPAAQIN RPSGPRRSSR EICKDMRRTC ALARTTRPIS 120
  121 PRRSSSVTST VSSTSRRSSA EVQSEVVTTR IPEDRRANKP TPPPRRPAEL VFDEDDSDDD 180
  181 FDEAVSPVEE TQTEQNEENN RLFSIIEENG SEGESTDSSS SCEAIYCDTT FESSPPNAQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [240-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTVTPSGRAL REVDTNIPVA VSLSRGKETG KGSWLAISVA VEDSPQEPSI QCPRLAVTRP  60
   61 SQSSGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [306-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPDVNGLTPR RSLFNGIGKM AGSTSTPKSF LVEEMPSIRT RSRTAANKKS ENTDMSSSFC  60
   61 NNSARPSRSC RPTSLVEPSL KNKLRNGSKG KAKAKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle