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View Structure Prediction Details

Protein: Cda9-PA, FBpp0309120
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cda9-PA, FBpp0309120.

Description E-value Query
Range
Subject
Range
gi|54636977, gi|... - gi|54636977|gb|EAL26380.1| GA14025 [Drosophila pseudoobscura pseudoobscura], gi|125811236|ref|XP_001...
gi|54636977|gb|E... - GA14025-PA [Drosophila pseudoobscura], GA14025 [Drosophila pseudoobscura pseudoobscura]
336.0 [0..1] [397..1]

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Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYSTLLILG LILTVALMSE AKSKSKKQKN KQNGILPMAE PCKPSKCKLP DCRCSDAALP  60
   61 TSKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 2j13A
Description: No description for 2j13A was found.

Predicted Domain #2
Region A:
Residues: [65-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGKENQIPQF VTITFDDAVN AVNFAQYELL FDGLINPDGC GAAGTFFLSH EYTDYVRVNA  60
   61 LYRAGHEIAL HSVTHGDGTD YWRSADVPTI EREFGAQLKM LETFAKVNPK KIQGMRLPFL 120
  121 QISGNNTFEA ARRLGLTYDS SWPTQKFKDP AMWPYTLDYK SKQDCQIGPC PEASIPGFWV 180
  181 NPMVTWTDTE GYSCSMIDAC VYPPEDDMDE LFDWMMENFN RHYLGNRAPF GMYLHAAWFS 240
  241 RGRNYFGAFK KFINHLNTYS DVYFTGISRM LEYVRKPTLG SPFKDCPDLP EAECRAVQCH 300
  301 VQKMSTGEER YMTVCDKCPS VYPWLDNPLG QQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1z7aA
Description: Crystal structure of conserved hypothetical protein from Pseudomonas aeruginosa PAO1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.33555575180152 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle