YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0311708, FBp...
Organism:	Drosophila melanogaster
Length:	203 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311708, FBp....

Description	E-value	Query Range	Subject Range
gi\|50928147, gi\|... - gi\|50928147\|ref\|XP_473601.1\| OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)], gi\|38345533\|e...	112.0	[0..3]	[191..399]
gi\|90591507, gi\|... - gi\|90591507\|ref\|ZP_01247149.1\| PKD:Leucine-rich repeat [Flavobacterium johnsoniae UW101], gi\|9043256...	111.0	[0..3]	[193..256]
gi\|38047921 - gi\|38047921\|gb\|AAR09863.1\| similar to Drosophila melanogaster CG10731 [Drosophila yakuba]	110.0	[0..1]	[203..1]
gi\|62319955 - gi\|62319955\|dbj\|BAD94052.1\| disease resistance - like protein [Arabidopsis thaliana]	110.0	[0..19]	[192..628]
gi\|116309677, gi... - gi\|125549425\|gb\|EAY95247.1\| hypothetical protein OsI_016480 [Oryza sativa (indica cultivar-group)], ...	109.0	[0..3]	[191..452]
gi\|113477255, gi... - gi\|71673924\|ref\|ZP_00671672.1\| Small GTP-binding protein domain [Trichodesmium erythraeum IMS101], g...	109.0	[0..4]	[202..61]
gi\|24940244 - gi\|24940244\|emb\|CAD42181.1\| serine-threonine protein kinase [Pisum sativum]	109.0	[0..2]	[202..154]

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Predicted Domain #1

Region A:
Residues: [1-203]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLNKLPRI TQLLARDPKD QRGIWGYVAV AFNQVDAERL SKVGANRLCA EWIIKNGGGV  60
   61 RFVESPSRLW KDYNSLPGEN TQFCIKVVDA SNSSIMKIGL EHLKDCRSID TVIFHNCKHL 120
  121 ENDGLEGLHH ISSSLQRLQV SGCYNITDSG LAVIGELKNL RQLLIFDMIF VKNMEAVAAS 180
  181 LKKQLPSCDI KATKMGLTLK PKE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	10.0
Match:	2omxA
Description:	No description for 2omxA was found.

Predicted functions:

Term	Confidence	Notes
receptor activity	1.2805827482533	bayes_pls_golite062009
transmembrane receptor activity	1.04460572705568	bayes_pls_golite062009
binding	0.993479397759839	bayes_pls_golite062009
protein binding	0.327172585911144	bayes_pls_golite062009
signal transducer activity	0.326703524397677	bayes_pls_golite062009
molecular transducer activity	0.326703524397677	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: