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View Structure Prediction Details

Protein: FBpp0308787, CG1...
Organism: Drosophila melanogaster
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308787, CG1....

Description E-value Query
Range
Subject
Range
gi|16186101 - gi|16186101|gb|AAL13999.1| SD05126p [Drosophila melanogaster]
330.0 [0..1] [700..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCESCGVEF TVFRRKRACF DCKRYYCANC IASRRCKRCS VFAQRPLSRT DLLKLKPKDL  60
   61 IFYLQSKHIS TEGCLEKEEL VGLVLTHVAQ VDRSRGSNAS SNSPGRGQAN PIDSLKQSCQ 120
  121 NFFSNLSDNI SDSLASFDSK VTTKPPESR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 1y02A
Description: Crystal Structure of a FYVE-type domain from caspase regulator CARP2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.59453362121051 bayes_pls_golite062009
protein binding 0.705012166135047 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [150-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPEVPTHIFE QPRVSTREIP TYASAVNGGP QHVHVQQQAT TTNGGSQSSS SPSTSTQSSN  60
   61 NRDASSSSQA HVAHQEARNE EQEDAQSKSD CECSDEEIMA TFSERVSISL KTDTSGRRVN 120
  121 AAAEPSPVDL ANVDNGPAGN TAPSPGCSKP GSSSSKADAS SQSSFEELGA IGGISDESK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [329-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANTDTNSSHL DQWQVLEVNR IEAVEETPTT SAADEILEVT LRSRPAVEGD DSEMGESTQA  60
   61 LNVNQRPANP SPAFYPAVPQ RTKKVTRRRS DGYLNRRYHS SDDESPVAPG GPGLSLGLST 120
  121 LSEHPEHGLH PHSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [463-622]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQSCQRCGKN KTNIRRHVEK MRRHLENSQM SEEDIKRELQ EFLTYLEQRT KSVDASDADS  60
   61 HAVSPLSVDA ISVAAGGRSP DMPITPTIEF SPTQDEDIRW DDDEGIHVYA APSDFEPTAG 120
  121 IDSRFVNLED FEDLKDLEGL TVKQLKEVLM LHRVDYKGCC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [623-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKQELLDRVS RLWKTMRECP AVEKLATDEL CKICMDAPIE CVFLECGHMA TCTSCGKVLN  60
   61 ECPICRQYIV RVVRFFRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.522879
Match: 1fbvA
Description: Cbl; N-terminal domain of cbl (N-cbl); CBL
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle