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View Structure Prediction Details

Protein: vis-PB
Organism: Drosophila melanogaster
Length: 524 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vis-PB.

Description E-value Query
Range
Subject
Range
FBpp0308697, achi-PC - The gene achintya is referred to in FlyBase by the symbol Dmel\achi (CG8819, FBgn0033749). It is a p...
344.0 [0..1] [524..1]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISPEQEEVN MVLDRHVRQN IKDLMHEAHV HASLLNNEGR DRFHSDSSLD QDSLHAVVGN  60
   61 DLSTEQG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANQVQNYHDM MVDSEHHVDI NGSLRKRRGN LPKSSVKILK RWLYEHRYNA YPSDAEKFTL  60
   61 SQEANLTVLQ VCNWFINARR RILPEMIRRE GND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 2dmnA
Description: No description for 2dmnA was found.

Predicted Domain #3
Region A:
Residues: [161-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLHFTISRRG KKVVGATEEV DGAGEIHEGI ANVLTNFEQY VQGPNGQMVK MEPEYEDSVI  60
   61 YSWQQAIANN PMGFQSLHSS LQATMIDKIK NYQMRKAAAI GGSAVGSGGA GGSSSNSSPA 120
  121 TSIL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [285-524]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYSLFGQLPP EFDDEEKPRP PKRVRTRTVA AKSPRENAKQ AKQKTGNKQE TMYCYKDSYG  60
   61 GIVVSPRSEG EESAQGYESC GPNSEEEVRF ETSHDWQSVI KTVFGTEEVS TSAGNNPGTS 120
  121 GSKASVQNTA IWNRNQTAKR DVNQQLTDFE SELNIIQASE IQTIDPTNSN QQDIGDNLQA 180
  181 DEVFTGAEAE AGQSQLSALS QGTSSDEEGK YKCLYYLVET AMAVRQNDDV QDDDFVYMGD 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle