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View Structure Prediction Details

Protein: didum-PB
Organism: Drosophila melanogaster
Length: 1196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for didum-PB.

Description E-value Query
Range
Subject
Range
gi|76643987 - gi|76643987|ref|XP_589072.2| PREDICTED: similar to myosin, heavy polypeptide 13, skeletal muscle, pa...
810.0 [0..1] [985..194]

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Predicted Domain #1
Region A:
Residues: [1-1056]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEEMLYAQ GAKIWVPHAD LVWESATLEE SYRKGAGFLK ICTDSGKLKE VKLKADGSDL  60
   61 PPLRNPAILV GQNDLTTLSY LHEPGVLHNL RVRFCERQII YTYCGIILVA INPYAEMPLY 120
  121 GPSIIRAYRG HAMGDLEPHI FALAEEAYTK LERENCNLSI IVSGESGAGK TVSAKYAMRY 180
  181 FAAVGGSESE TQVERKVLAS SPIMEAFGNA KTTRNDNSSR FGKFTKLLFR NQMGVMFLQG 240
  241 ATMHTYLLEK SRVVYQAQGE RNYHIFYQLC AARSKYPELV LDHQDKFQFL NMGGAPEIER 300
  301 VSDAEQFNET VQAMTVLGFS IQQIADIVKI LAGILHLGNI QVSKKFNEGS EEEDSDSCDI 360
  361 FHNDIHLQIT ADLLRVSADD LRRWLLMRKI ESVNEYVLIP NSIEAAQAAR DALAKHIYAK 420
  421 LFQYIVGVLN KSLNNGSKQC SFIGVLDIYG FETFEVNSFE QFCINYANEK LQQQFNQHVF 480
  481 KLEQEEYLKE GITWTMIDFY DNQPCIDLIE SRLGVLDLLD EECRMPKGSD ESWAGKLIGK 540
  541 CNKFPHFEKP RFGTTSFFIK HFSDTVEYDV NGFLEKNRDT VSKELTQVLS ESNMSLAKQV 600
  601 MTLEEIDTLC VDSAKSSTLG GRVVISAGRK QVVPSKQHRK TVGSQFQESL ASLISTLHAT 660
  661 TPHYVRCIKP NDDKVAFKWE TAKIIQQLRA CGVLETVRIS AAGFPSRWLY PDFYMRYQLL 720
  721 VYRSKLDKND MKLSCRNIVM KWIQDEDKYR FGNTQIFFRA GQVAFLEQVR ANLRKKYITI 780
  781 VQSVVRRFVY RRQFLRIQKV INGIQKHARG YLARERTQKM REARAGLILS KYARGWLCRR 840
  841 RYLRLRHSIS GIQTYARGML ARNKFHAMRD HYRAVQIQRF VRGALARRAY QKRRRNIIIC 900
  901 QAAIRRFLAR RKFKRMKAEA KTISHMENKY MGLENKIISM QQRIDELNRD NSNLKHKTSE 960
  961 ISVLKMKLEL KKTLEAEFKN VKAACQDKDK LIEALNKQLE AERDEKMQLL EENGHAQEEW1020
 1021 ISQKQTWRQE NEELRRQIDE IIDMAKNAEV NQRNQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [1057-1196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRMLAEIDNR ELNEAYQRAI KDKEVIENEN FMLKEELSRL TAGSFSLHAR KASNASSQNE  60
   61 DDVGYASAKN TLDINRPPDL LSKNYSYNDS TSLVVKLRSI LEEEKQKHKV LQEQYIKLSS 120
  121 RHKPTEDSFR TACRLAGRGT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle