| Protein: | gi|21645125, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 393 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21645125, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..1] | [381..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MAVNVYSTNV TSENLSRHDM LAWVNDCLQS QFSKIEELCT GAAYCQFMDM LFPNSVPVKR 60
61 VKFRTNLEHE YIQNFKILQA GFKKMSVDKI IPVDKLIKGR FQDNFEFLQW FKKFFDANYD 120
121 GREYDPVAQR GGVKLGNGNG
|
| Detection Method: |  |
| Confidence: | 76.0 |
| Match: | 1wyoA |
| Description: | Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [141-272] |
1 11 21 31 41 51
| | | | | |
1 HGSNGGSGVG SSNNDLHLMH RRPLQAPASG GRMPARVIAS TGTVLSKLRT PIIPIDKLVK 60
61 GRFQDNFEFL QWFKKFFDAN YDGRDYDASA VREGAPMGFG SGAVKSLPGT AASGVSSSYR 120
121 RGPSATTRPA MT
|
| Detection Method: | |
| Confidence: | 5.09 |
| Match: | 1vkaA |
| Description: | Southeast Collaboratory for Structural Genomics: Hypothetical Human Protein Q15691 N-Terminal Fragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 6.0562477479739 | bayes_pls_golite062009 |
| microtubule plus-end binding | 5.72370607907493 | bayes_pls_golite062009 |
| microtubule binding | 5.63808442303747 | bayes_pls_golite062009 |
| tubulin binding | 5.63161872515663 | bayes_pls_golite062009 |
| actin binding | 5.4843525466095 | bayes_pls_golite062009 |
| actin filament binding | 3.58546515893973 | bayes_pls_golite062009 |
| binding | 2.73681134719616 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.33067686982903 | bayes_pls_golite062009 |
| protein binding | 2.17650965264372 | bayes_pls_golite062009 |
| structural molecule activity | 0.952313983641982 | bayes_pls_golite062009 |
| dynein binding | 0.282231591450947 | bayes_pls_golite062009 |
|
Region A: Residues: [273-393] |
1 11 21 31 41 51
| | | | | |
1 SAVKPTVSKV LPRTNNAAPA SRINACANST GTVKKNDVSN SVNNQQIEEM SNQVMDMRIN 60
61 LEGLEKERDF YFSKLRDIEI LCQEADDAEA HPIIQKILDI LYATEDGFAP PDDAPPEDEE 120
121 Y
|
| Detection Method: | |
| Confidence: | 27.522879 |
| Match: | 1txqB |
| Description: | Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued |
Matching Structure (courtesy of the PDB): |
|
