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View Structure Prediction Details

Protein: gus-PE
Organism: Drosophila melanogaster
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gus-PE.

Description E-value Query
Range
Subject
Range
gus-PD - The gene gustavus is referred to in FlyBase by the symbol Dmel\gus (CG2944, FBgn0026238). It is a pr...
244.0 [0..1] [351..11]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHICIYMSMY KGGRTPSIRS SERRRPQSVS SISTLSPRVV LSRLEPREFE RLRLSYKIAI  60
   61 DQRRSRSCRG MNMGQKISGG VKTVSRNDSQ STFKPIIPRE L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QADFVKPARI DILLDMPPAS RDLQLKHSWN SEDRSLNIFV KEDDKLTFHR HPVAQSTDCI  60
   61 RGKVGLTKGL HIWEIYWPTR QRGTHAVVGV CTADAPLHSV GYQSLVGSTE QSWGWDLGRN 120
  121 KLYHDSKNCA GVTYPAILKN DEAFLVPDKF LVALDMDEGT LSFIVDQQYL GIAFRGLRGK 180
  181 KLYPIVSAVW GHCEITMRYI GGLDPEPLPL MDLCRRTIRQ KIGRTNLEEH IQQLQLPLSM 240
  241 KTYLLYKNRR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 2fnjA
Description: No description for 2fnjA was found.

Predicted functions:

Term Confidence Notes
binding 1.35172572100661 bayes_pls_golite062009
protein binding 0.524849326544427 bayes_pls_golite062009
carbohydrate binding 0.456644264180763 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle